课题基金 / 基金详情

Collaborative Research: Integrated In Silico and Non-Target Analytical Framework for High Throughput Prioritization of Bioactive Transformation Products

Collaborative Research: Integrated In Silico and Non-Target Analytical Framework for High Throughput Prioritization of Bioactive Transformation Products
合作研究:集成计算机和非目标分析框架,用于生物活性转化产品的高通量优先排序
批准号:
1609669
负责人:
Eric Patterson
金额:
$16.0万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-09-01 至 2020-08-31

项目摘要

项目成果

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中文摘要
翻译
今天,水资源受到一种复杂的化学污染物混合物的威胁,其中许多污染物被传统的水和废水处理技术去除得很差。其中包括有效的药物类别,包括合成类固醇,它们的生物活性可以在环境中持续存在,尽管它们通过自然和工程过程进行转化。在这个由美国国家科学基金会化学部环境化学科学计划资助的项目中,爱荷华大学、华盛顿大学塔科马分校和西雅图分校、加州大学圣地亚哥分校和石溪大学的研究人员共同开发了一个预测框架,以帮助促进更强有力的水法规和改进的化学风险评估。最终,该项目的成果将推动社会走向更安全和更可持续的供水,特别是在社会变得更加依赖经处理的废水的再利用来弥合日益扩大的供需缺口的情况下。这项工作的更广泛影响包括通过使代表不足的群体能够参与研究活动来促进本科教育,将现代计算工具纳入学生学习,以及通过开发普通教育课程来促进非技术受众的科学素养。这项工作代表了水质管理的新范式。该项目聚焦于广泛使用的非生物处理过程--氯化,以及无处不在但研究不足的污染物类别、有效的合成孕激素和糖皮质激素,将开发一个基于计算和实验方法的高通量框架,用于对高风险、生物活性转化产品的先验预测。该方法结合(I)使用母体(部分电荷、氧化电位)和可能产物(热力学稳定性)的描述符来确定可能的氯化产物的理论计算。(2)利用高通量虚拟配体筛选,根据生物活性(即风险)对潜在产品种类进行优先排序。一旦确定,将对高风险产品的形成和产量进行评估(Iii)在各种氯化条件下进行小规模实验,以及(Iv)通过在废水和接收水中进行高分辨率质谱学检测。研究成果确保,当新出现的污染物类别不可避免地受到监管时,可以采用更全面的方法,也可以解决其生物活性产品带来的风险。这个合作项目为2名研究生、2名博士后和几名本科生提供环境化学、计算化学和生物化学的跨学科培训。
英文摘要
Today, water resources are threatened by a complex mixture of chemical pollutants, many of which are poorly removed by traditional water and wastewater treatment technologies. These include potent pharmaceutical classes including synthetic steroids, whose bioactivity can persist in the environment despite their transformation through natural and engineered processes. In this project funded by the Environmental Chemical Sciences Program of the Chemistry Division at the National Science Foundation, a collaborative team of researchers at the University of Iowa, University of Washington at Tacoma and Seattle, University of California at San Diego, and Stony Brook University develops a predictive framework to help catalyze more robust water regulations and improved chemical risk assessment. Ultimately, outcomes of this project moves society toward more safe and sustainable water supplies, particularly as society becomes more reliant on reuse of treated wastewater to bridge the widening gap in supply and demand. The broader impacts of this work include advancing undergraduate education by enabling the participation of under-represented groups in research activities, integrating modern computational tools into student learning, and promoting scientific literacy in non-technical audiences through general education coursework development. This work represents a new paradigm in water quality management. Focusing on a widely utilized abiotic treatment process, chlorination, and ubiquitous but understudied pollutant classes, potent synthetic progestins and glucocorticoids, this project will develop a high-throughput framework built upon computational and experimental methods for the a priori prediction of high risk, bioactive transformation products. This approach integrates (i) theoretical calculations to identify probable chlorination products using descriptors for both parent (partial charges, oxidation potentials) and likely product (thermodynamic stability) species. (ii) Potential product species are prioritized based on bioactivity (i.e., risk) using high throughput virtual ligand screening. Once identified, formation and yield of high risk products are evaluated (iii) in bench-scale experiments across a range of chlorination conditions and (iv) via high resolution mass spectrometric detection in wastewaters and receiving waters. Research outcomes ensures that when emerging pollutant classes are inevitably regulated, a more holistic approach is available that also addresses risks posed by their bioactive products. This collaborative project provides transdisciplinary training of 2 graduate students, 2 postdocs, and several undergraduates at the interface of environmental chemistry, computational chemistry, and biochemistry.
期刊论文(2)
专著(0)
科研奖励(0)
会议论文
Atropselective Oxidation of 2,2′,3,3′,4,6′-Hexachlorobiphenyl (PCB 132) to Hydroxylated Metabolites by Human Liver Microsomes and Its Implications for PCB 132 Neurotoxicity
人肝微粒体将 2,2-,3,3-,4,6-六氯联苯 (PCB 132) 选择性氧化成羟基代谢物及其对 PCB 132 神经毒性的影响
DOI: 10.1093/toxsci/kfz150
发表时间: 2019
期刊: Toxicological Sciences
影响因子: 3.8
作者: [Uwimana, Eric, Cagle, Brianna, Yeung, Coby, Li, Xueshu, Patterson, Eric V., Doorn, Jonathan A., Lehmler, Hans-Joachim]
通讯作者: Lehmler, Hans-Joachim
Intramolecular [2 + 2] Photocycloaddition of Altrenogest: Confirmation of Product Structure, Theoretical Mechanistic Insight, and Bioactivity Assessment
Altrenogest 的分子内 [2 2] 光环加成:产物结构的确认、理论机制的洞察和生物活性评估
DOI: 10.1021/acs.joc.9b02070
发表时间: 2019
期刊: The Journal of Organic Chemistry
影响因子: --
作者: [Pflug, Nicholas C., Patterson, Eric V., Martinović-Weigelt, Dalma, Kolodziej, Edward P., Gloer, James B., McNeill, Kristopher, Cwiertny, David M., Wammer, Kristine H.]
通讯作者: Wammer, Kristine H.
CHS: Small: Developing and Validating a Physically Accurate Light-Scattering Model for the Rendering of Bird and Other Dinosaur Feathers
  • 批准号:
    2007974
  • 项目类别:
    Continuing Grant
  • 资助金额:
    $47.73万
  • 财政年份:
    2021
  • 负责人:
    Eric Patterson
  • 依托单位:
RUI: Quantum Characterization of Stair-Stepped Base Stacking Interactions in tRNA
  • 批准号:
    0746096
  • 项目类别:
    Standard Grant
  • 资助金额:
    $15.8万
  • 财政年份:
    2008
  • 负责人:
    Eric Patterson
  • 依托单位:
国内基金
海外基金
Research on Quantum Field Theory without a Lagrangian Description
  • 批准号:
    24ZR1403900
  • 项目类别:
    省市级项目
  • 资助金额:
    --
  • 批准年份:
    2024
  • 负责人:
    SATOSHI NAWATA
  • 依托单位:
Cell Research
Cell Research
Cell Research (细胞研究)