I-Corps: Enhanced Protein Discovery Tools for Proteomics Research

I-Corps：用于蛋白质组学研究的增强型蛋白质发现工具

• 批准号: 1644537
• 负责人: Jonathan Minden
• 金额: $ 5万
• 依托单位: Carnegie-Mellon University
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2016
• 资助国家: 美国
• 起止时间: 2016-08-01 至 2018-01-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1644537&HistoricalAwards=false
• 关键词: Corps; Enhanced; Protein; Discovery; Tools

The broader impact/commercial potential of this I-Corps project focuses on developing tools for the biomedical research community, in particular the discovery of proteins that are altered during the normal or abnormal functioning of cells, tissues and organisms. The term for this protein discovery field is proteomics. Hundreds of thousands of proteomics samples are analyzed around the world annually. These innovations will significantly benefit the biomedical research community. These tools will allow scientists to understand complex processes such as how the microbiome affects behavior, how development is affected by genetic mutations, and how cancer cells change their behavior upon chemotherapy. The number of questions these tools can help address is limitless. All major research institutions have proteomics facilities that serve dozens to hundreds of researchers. These tools will be used both by individual research labs and proteomics core facilities, as well as contract research facilities and pharma companies.This I-Corps project addresses technological needs in the field of proteomics. A very large fraction of proteomics samples involve separating complex mixtures of different proteins into individual protein species by a process called gel electrophoresis, where electric currents are used to separate proteins by size and charge in thin slabs of gel material. This work concentrates on two key unmet needs. First is improving the detection sensitivity of proteins within electrophoresis gels. Convention detection instruments can detect proteins over a 1,000-fold concentration range, but proteins normally exist in cells over a million-fold range. The device developed here is capable of detecting proteins over a million-fold concentration range. The next unmet need is to efficiently transfer proteins from gels to a mass spectrometer, which is used to chemically characterize proteins. The method under development here will greatly increase the throughput of this process.

这个I-Corps项目的更广泛影响/商业潜力侧重于为生物医学研究界开发工具，特别是发现在细胞、组织和有机体正常或异常运作期间发生改变的蛋白质。这个蛋白质发现领域的术语是蛋白质组学。 每年在世界各地分析数十万个蛋白质组学样本。这些创新将使生物医学研究界受益匪浅。这些工具将使科学家能够了解复杂的过程，例如微生物组如何影响行为，基因突变如何影响发育，以及癌细胞如何在化疗后改变其行为。这些工具可以帮助解决的问题数量是无限的。所有主要的研究机构都有蛋白质组学设施，为数十至数百名研究人员提供服务。这些工具将被用于个人研究实验室和蛋白质组学核心设施，以及合同研究设施和制药公司。这个I-Corps项目解决了蛋白质组学领域的技术需求。很大一部分蛋白质组学样本涉及通过称为凝胶电泳的过程将不同蛋白质的复杂混合物分离为单个蛋白质种类，其中电流用于在凝胶材料的薄板中按大小和电荷分离蛋白质。这项工作集中在两个关键的未满足的需求。首先是提高电泳凝胶内蛋白质的检测灵敏度。常规检测仪器可以检测超过1,000倍浓度范围的蛋白质，但蛋白质通常存在于细胞中超过百万倍的范围。这里开发的设备能够检测超过百万倍浓度范围的蛋白质。下一个未满足的需求是有效地将蛋白质从凝胶转移到质谱仪，该质谱仪用于对蛋白质进行化学表征。这里正在开发的方法将大大提高这一过程的吞吐量。