Modular biochemical networks of maize anti-pathogen defense defined by integrating synthetic biochemistry, genetics and physiological function
Modular biochemical networks of maize anti-pathogen defense defined by integrating synthetic biochemistry, genetics and physiological function
批准号:
1758976
负责人:
Eric Schmelz
金额:
$85.6万
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-08-01 至 2022-07-31
中文摘要
农作物对病虫害的有效生化防御机制对农业生产至关重要。单个品种之间的自然遗传多样性提供了独特的,但未被充分利用的抗逆性层次。玉米(Zea mays)是美国最重要的农艺作物,也是基因最多样化的作物之一。从概念上讲,与促进松树伤口愈合的粘性汁液类似,玉米受到一种被称为二萜的诱导性化学物质的保护,这种化学物质可以作为抗生素来抑制害虫的袭击和疾病。根据经验,缺乏二萜防御的玉米植株显示出真菌病损害的急剧增加。当前的项目通过定义玉米二萜防御的形成和多种生物活性,揭示了作物抗逆性的机制。已建立的自交系之间的可变化学多样性将利用最先进的遗传作图和生化技术来识别二萜生物合成基因和酶功能。整合一系列系统的计算、湿实验室和基于实地的方法,将发现玉米二萜的生物合成机制、化学结构和生态重要性。面对提高农业生产力的迫切需求,这些成果将促成加强作物保护的新战略。通过现成的食品级真菌激活二萜合成将被开发为高中的教育工具,以培养对植物免疫反应的知识好奇心,它们的农业用途,以及生物化学对人类的重要性。该项目将通过发现和利用生物化学作物防御,并通过使用我们的综合方法实施高中课程研究模块来教授现代STEM概念和技术,从而对社会产生积极影响。生物和非生物压力源的复杂组合可以克服作物防御并促进产量损失。作为全球占主导地位的粮食作物,玉米(Zea mays)含有独特的、大部分尚未确定的特化二萜代谢物,这些代谢物通过赋予对病原体的定量保护来促进植物的抗病性。对玉米生化网络分子机制的基本理解和农业应用将对进一步优化作物抗逆性至关重要。这个合作项目将利用互补的遗传、生化和生态方法来获得控制玉米抗病的专门代谢物的精确机制知识。整合功能基因组学、代谢组学、正向遗传学、DNA合成和组合体外和体内蛋白质生化方法将使快速途径发现能够阐明玉米特异性二萜代谢网络。玉米突变体在特定途径节点上的平行生成和分析将揭示真菌诱导的二萜类生物合成与植物病原菌抗性之间的相互关系。此外,纯化二萜与一系列玉米病原体的体外抗真菌生物测定将阐明二萜生物活性背后的结构-功能关系。该项目的跨学科性质为培养博士后、研究生和本科生提供了一个极好的框架,并将项目团队与当地高中教师联系起来,开发课程研究模块,作为一个平台,让高中生参与植物与病原体相互作用的交叉原理。为了促进玉米-微生物相互作用与农业创新的研究和教育,这项工作产生的知识和资源,如酶/代谢物目录、突变品系和培训模块,将与科学界广泛共享。该奖项反映了美国国家科学基金会的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
Crop biochemical defense mechanisms effective against most pests and diseases are essential to agricultural productivity. The natural genetic diversity among individual cultivars provides unique, but underutilized, layers of stress resilience. Maize (Zea mays) is the agronomically most important U.S. crop and among the most genetically diverse. Conceptually parallel to the sticky sap promoting wound healing in pine trees, maize is protected by inducible chemicals, termed diterpenoids, that act as antibiotics to suppress pest attack and disease. Empirically, maize plants lacking diterpenoid defenses display dramatic increases in fungal disease damage. The current project unveils mechanisms of crop stress resilience by defining the formation and diverse bioactivities underlying maize diterpenoid defenses. Variable chemical diversity between established inbred lines will be leveraged to identify diterpenoid-biosynthetic genes and enzyme functions using state-of-the-art genetic mapping and biochemical technologies. Integrating a systematic array of computational, wet-lab and field-based approaches will discover the biosynthetic machinery, chemical structures, and ecological importance of maize diterpenoids. These deliverables will enable new strategies for enhancing crop protection in the face of pressing needs for improving agricultural productivity. The activation of diterpenoid synthesis by readily available food-grade fungi will be developed as an educational tool in high schools to foster intellectual curiosity about plant immune responses, their agricultural use, and the importance of biochemicals to humans. The project will positively impact society by discovering and harnessing biochemical crop defenses and teaching modern STEM concepts and technologies through implementing high school Lesson Study Modules using our integrated approach.Complex combinations of biotic and abiotic stressors can overcome crop defenses and promote yield losses. As the dominant global grain crop, maize (Zea mays) contains unique and largely unresolved specialized diterpenoid metabolites that contribute to plant resilience by conferring quantitative protection against pathogens. A foundational understanding and agricultural application of molecular mechanisms underlying maize biochemical networks will be essential to further optimize crop resilience. This collaborative project will leverage complementary genetic, biochemical and ecological approaches to gain a precise mechanistic knowledge of specialized metabolites governing maize disease resistance. Integrating functional genomics, metabolomics, forward genetics, DNA synthesis, and combinatorial in vitro and in vivo protein biochemical approaches will enable rapid pathway discovery to elucidate maize-specific diterpenoid-metabolic networks. Parallel generation and analysis of maize mutants in defined pathway nodes will unravel the interrelations between fungal-elicited diterpenoid biosynthesis and pathogen resistance in planta. In tandem, in vitro anti-fungal bioassays of purified diterpenoids with a range of maize pathogens will illuminate the structure-function relationships underlying diterpenoid bioactivity. The cross-disciplinary nature of this project provides an excellent framework for training postdoctoral, graduate and undergraduate students, and will be leveraged to connect the project team with local high school teachers for developing Lesson Study Modules as a platform to engage high school students in cross-cutting principles underlying plant-pathogen interactions. To promote research and education at the confluence of maize-microbe interactions and agricultural innovation, knowledge, resources such as enzyme/metabolite catalogs, mutant lines, and training modules arising from this work will be broadly shared with the scientific community.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
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A Customizable Approach for the Enzymatic Production and Purification of Diterpenoid Natural Products
二萜天然产物酶法生产和纯化的可定制方法
DOI:
10.3791/59992
发表时间:
2019
期刊:
Journal of Visualized Experiments
影响因子:
--
作者:
[Murphy, Katherine M., Chung, Siwon, Fogla, Shruti, Minsky, Hana B., Zhu, Karen Yong, Zerbe, Philipp]
通讯作者:
Zerbe, Philipp
DOI:
10.1104/pp.17.01351
发表时间:
2018-04-01
期刊:
PLANT PHYSIOLOGY
影响因子:
7.4
作者:
[Mafu, Sibongile, Ding, Yezhang, Zerbe, Philipp]
通讯作者:
Zerbe, Philipp
DOI:
10.1038/s41477-019-0509-6
发表时间:
2019-10-01
期刊:
NATURE PLANTS
影响因子:
18
作者:
[Ding, Yezhang, Murphy, Katherine M., Schmelz, Eric A.]
通讯作者:
Schmelz, Eric A.
DOI:
10.1038/s41477-020-00787-9
发表时间:
2020-10-26
期刊:
NATURE PLANTS
影响因子:
18
作者:
[Ding, Yezhang, Weckwerth, Philipp R., Huffaker, Alisa]
通讯作者:
Huffaker, Alisa
海外基金