Chromosomal inversions and gene expression in Mimulus
Chromosomal inversions and gene expression in Mimulus
批准号:
1940785
负责人:
John Kelly
金额:
$74.96万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-02-01 至 2024-01-31
中文摘要
染色体倒位是一种突变,其中染色体的一部分在方向上翻转。该研究项目将为这类重要的突变对几种猴花的基因表达变异提供广泛、定量的评估。它将为一名研究生和一名博士后研究科学家提供必要的遗传和生物信息学培训。该项目还将扩大正在进行的努力,让堪萨斯州的高中生参与遗传学研究。倒序改变DNA序列的方式与核苷酸取代(最常被研究的突变类型)有着根本的不同,并与一系列自然现象有关,包括对新环境的适应和物种形成。在人类中,它们会导致许多疾病,也会导致非疾病特征的变异。然而,尽管有无数的例子,对于逆序对自然遗传变异和基因组进化的贡献有多大,仍然没有定量的理解。本研究项目将在猴花(Mimulus guttatus)的物种复合体中提供定量评估,其中许多与倒置相关的不同现象已被证明。相对于引起基因表达差异的其他突变类型,倒置的重要性将在三个不同的生物组织水平上进行评估:种群内个体之间、物种种群之间和物种之间。该结果有望为染色体倒位如何影响基因表达、适应、种群差异和物种形成提供新的见解。本项目由分子和细胞生物科学部的遗传机制项目和环境生物学部的进化过程项目共同资助。该奖项反映了美国国家科学基金会的法定使命,并通过使用基金会的知识价值和更广泛的影响审查标准进行评估,被认为值得支持。
英文摘要
Chromosomal inversions are a type of mutation in which a section of a chromosome is flipped in orientation. This research project will provide a broad, quantitative evaluation of this important class of mutations to gene expression variation in several species of monkeyflower. It will provide essential genetic and bioinformatic training to a graduate student and a post-doctoral research scientist. The project will also extend ongoing efforts to engage Kansas high-school students in genetics research.Inversions alter the DNA sequence in a way that is fundamentally different from nucleotide substitutions (the most commonly studied kind of mutation) and have been implicated in a remarkable range of natural phenomena including adaptation to novel environments and speciation. In humans, they cause of a number of diseases and also contribute to variation in non-disease traits. However, despite countless examples, there still is no quantitative understanding for how much inversions contribute to natural genetic variation and genome evolution. This research project will provide a quantitative evaluation within a species complex of monkeyflowers (Mimulus guttatus) where many of the disparate phenomena associated with inversions have been demonstrated. The importance of inversions, relative to other mutation types causing differences in gene expression, will be estimated at three different levels of biological organization: between individuals within a population, between populations of a species, and between species. The results are expected to provide new insights into how chromosomal inversions influence gene expression, adaptation, population divergence, and speciation.This project is co-funded by the Genetic Mechanisms Program in the Division of Molecular and Cellular Biosciences and by the Evolutionary Processes Program in the Division of Environmental Biology.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(7)
专著(0)
科研奖励(0)
会议论文
The promise and deceit of genomic selection component analyses.
基因组选择成分分析的希望和欺骗。
DOI:
10.1098/rspb.2021.1812
发表时间:
2021
期刊:
Proceedings. Biological sciences
影响因子:
--
作者:
[Kelly,JohnK]
通讯作者:
Kelly,JohnK
DOI:
10.1371/journal.pgen.1011072
发表时间:
2024-04-01
期刊:
PLOS GENETICS
影响因子:
4.5
作者:
[Veltsos,Paris, Kelly,John K.]
通讯作者:
Kelly,John K.
High performance in vivo imaging equipment to facilitate infectious disease research
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批准号:MR/X012158/1
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项目类别:Research Grant
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资助金额:$52.28万
-
财政年份:2022
-
负责人:John Kelly
-
依托单位:
Detecting Student's Dual-Process Reasoning in Introductory Undergraduate Physics
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批准号:2025141
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项目类别:Standard Grant
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资助金额:$11.23万
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财政年份:2021
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负责人:John Kelly
-
依托单位:
Understanding the molecular basis and role of parasite dormancy in Chagas disease
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批准号:MR/T015969/1
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项目类别:Research Grant
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资助金额:$97.93万
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财政年份:2020
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负责人:John Kelly
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依托单位:
The Inclusive Engineering Consortium Stakeholders' Workshop
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批准号:1935545
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项目类别:Standard Grant
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资助金额:$10.0万
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财政年份:2019
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负责人:John Kelly
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依托单位:
SG: Collaborative Research: Measuring intra-locus conflict across the genome in a dioecious plant
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批准号:1753630
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项目类别:Standard Grant
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资助金额:$10.19万
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财政年份:2018
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负责人:John Kelly
-
依托单位:
Development of the UroMark assay. A non-invasive test for the detection of bladder cancer in urinary sediment cells
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批准号:MR/M025411/1
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项目类别:Research Grant
-
资助金额:$181.9万
-
财政年份:2015
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负责人:John Kelly
-
依托单位:
Graduate Research Fellowship Program (GRFP)
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批准号:1257295
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项目类别:Fellowship Award
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资助金额:$4.2万
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财政年份:2012
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负责人:John Kelly
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依托单位:
Management and Operations of the Arecibo Observatory (AO)
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批准号:1100968
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项目类别:Cooperative Agreement
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资助金额:$0.0万
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财政年份:2011
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负责人:John Kelly
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依托单位:
Management and Operations of the Arecibo Observatory (AO)
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批准号:1160876
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项目类别:Cooperative Agreement
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资助金额:$3466.94万
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财政年份:2011
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负责人:John Kelly
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依托单位:
Collaborative Research: The Unintended Ecological Consequences of Nanomaterials: Effects of nanotitania in benthic systems
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批准号:1067439
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项目类别:Standard Grant
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资助金额:$24.25万
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财政年份:2011
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负责人:John Kelly
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依托单位:
DISSERTATION RESEARCH: Experimental Evolution of Mating System under Varying Pollinator Availability in Mimulus guttatus
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批准号:1010899
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项目类别:Standard Grant
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资助金额:$1.5万
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财政年份:2010
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负责人:John Kelly
-
依托单位:
Doctoral Dissertation Research: Legal Practice and the Production of Licit Subjects in Thailand
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批准号:1023830
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项目类别:Standard Grant
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资助金额:$0.8万
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财政年份:2010
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负责人:John Kelly
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依托单位:
The molecular basis for epigenetic inheritance of trichome patterning in Mimulus
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批准号:0951254
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项目类别:Standard Grant
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资助金额:$56.05万
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财政年份:2010
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负责人:John Kelly
-
依托单位:
DISSERTATION RESEARCH: A Cytogenetic Characterization of the Mimulus Guttatus Genome
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批准号:0910321
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项目类别:Standard Grant
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资助金额:$1.13万
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财政年份:2009
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负责人:John Kelly
-
依托单位:
Political and economic antecedents and outcomes of social pacts in Western Europe 1980-2006
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批准号:ES/E017185/1
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项目类别:Research Grant
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资助金额:$9.84万
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财政年份:2007
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负责人:John Kelly
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依托单位:
CBA: QEIB: Estimation and Interpretation of Allele Frequencies: Novel Theoretical Analyses and High-Throughput Quantitation by DNA Pooling
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批准号:0609722
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项目类别:Continuing Grant
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资助金额:$0.0万
-
财政年份:2006
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负责人:John Kelly
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依托单位:
A Genomic Experiment to Determine the Nature of Epistasis in Mimulus Guttatus
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批准号:0543052
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项目类别:Continuing Grant
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资助金额:$0.0万
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财政年份:2006
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负责人:John Kelly
-
依托单位:
CRI: Advanced Sensor Network Applications for Environmental Monitoring Systems
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批准号:0454259
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项目类别:Continuing Grant
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资助金额:$0.0万
-
财政年份:2005
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负责人:John Kelly
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依托单位:
The Relocatable Atmospheric Observatory: A Global Incoherent Scatter Radar
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批准号:0121483
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项目类别:Cooperative Agreement
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资助金额:$4400.0万
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财政年份:2003
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负责人:John Kelly
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依托单位:
16 Panel Advanced Modular Incoherent Scatter Radar (AMISR)
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批准号:0232193
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项目类别:Standard Grant
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资助金额:$289.13万
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财政年份:2002
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负责人:John Kelly
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依托单位:
海外基金