Collaborative Research: Interfacing Students at Three Universities to Elucidate Enzymatic Transformations of Guanide Compounds that Impact Health and the Environment

合作研究：与三所大学的学生合作，阐明影响健康和环境的胍化合物的酶促转化

• 批准号: 2203751
• 负责人: Betsy Martinez-Vaz
• 金额: $ 11.84万
• 依托单位: Hamline University
• 依托单位国家: 美国
• 项目类别: Continuing Grant
• 财政年份: 2022
• 资助国家: 美国
• 起止时间: 2022-06-01 至 2025-05-31
• 项目状态: 未结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=2203751&HistoricalAwards=false
• 关键词: Collaborative; Research; Interfacing; Students; Three

With the support of the Chemistry of Life Processes (CLP) program in the Division of Chemistry, Drs. Martin St. Maurice from Marquette University, Lawrence Wackett from University of Minnesota-Twin Cities, and Betsy Martinez-Vaz from Hamline University are studying the enzymes and metabolic pathways that microbes use to degrade guanide and biguanide compounds that are commonly found in fertilizers, fuel propellants and pharmaceuticals. The most notable example is the biguanide drug metformin, which represents the fourth most prescribed pharmaceutical on the planet. Metformin is entering wastewater treatment plants at an alarming rate, with no clear sense of how it is being degraded by microorganisms. Using detailed studies of enzyme structure/function, chemical biology, comparative genomics and microbiology, this project aims to identify the metabolic pathway(s) and characterize the bacterial enzymes responsible for biodegrading metformin and related guanide and biguanide compounds. This project is expected to provide useful data to assist scientists and engineers in the development of better bioremediation practices in municipal water treatment plants where metformin is a major entering chemical. Further, this project integrates teaching, mentorship and training across three universities by incorporating the proposed research directly into graduate training, multi-institutional undergraduate courses, career mentorship and summer internships, significantly broadening the impact of the project.This project seeks to generate a comprehensive description of the metabolic pathways that are available naturally for the degradation of guanidinium compounds by microbial species and their relevant enzymes in wastewater and also in the human gut environment. The central metabolic artery includes the combined activities of guanylurea hydrolase, guanidine carboxylase, carboxyguanidine deiminase and allophanate hydrolase. The molecular contributions to the substrate selectivity of guanidine carboxylase will be characterized by x-ray crystallography and enzyme kinetic analysis. The structure and function of the carboxyguanidine deiminase enzyme will be examined by investigating the mechanism of catalysis, the functional role of the subunits and the potential for substrate channeling. The pathway and enzyme(s) responsible for bacterial metformin degradation will be identified by a combination of enzyme isolation, purification, and comparative genomics, across potentially relevant bacterial species, followed by detailed structural and functional characterization of the metformin-degrading enzyme(s). This project is expected to provide new information on how biguanide compounds are funneled into biodegradation pathways, providing a gateway to better understanding of how one important class of nitrogen-rich man-made compounds, produced across a variety of industrial sectors, is environmentally degraded.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.

在化学系生命过程化学（CLP）项目的支持下，马奎特大学的Martin St. Maurice博士、明尼苏达大学双城分校的Lawrence Wackett博士和哈姆林大学的Betsy Martinez-Vaz博士正在研究微生物用于降解肥料、燃料推进剂和药物中常见的胍和双胍化合物的酶和代谢途径。最著名的例子是双胍类药物二甲双胍，它是地球上第四大处方药。代谢产物正以惊人的速度进入废水处理厂，但人们并不清楚它是如何被微生物降解的。通过对酶结构/功能、化学生物学、比较基因组学和微生物学的详细研究，本项目旨在确定代谢途径并表征负责生物降解二甲双胍和相关胍类和双胍类化合物的细菌酶。该项目预计将提供有用的数据，以协助科学家和工程师在城市水处理厂，二甲双胍是一个主要的进入化学品更好的生物修复实践的发展。此外，该项目通过将拟议的研究直接纳入研究生培训，多机构本科课程，职业导师和暑期实习，该项目旨在全面描述微生物物种降解胍化合物的天然代谢途径，它们在废水和人类肠道环境中的相关酶。中央代谢动脉包括脒基脲水解酶、胍羧化酶、羧基胍脱亚胺酶和脲基甲酸水解酶的联合活性。胍羧化酶的底物选择性的分子贡献将通过X射线晶体学和酶动力学分析来表征。羧基胍脱亚胺酶的结构和功能将通过研究催化机制，亚基的功能作用和底物通道的潜力来研究。将通过酶分离、纯化和比较基因组学的组合，在潜在相关的细菌种属中鉴定负责细菌二甲双胍降解的途径和酶，然后对二甲双胍降解酶进行详细的结构和功能表征。该项目预计将提供有关双胍化合物如何进入生物降解途径的新信息，为更好地了解一类重要的富氮人造化合物如何在各种工业部门生产，该奖项反映了NSF的法定使命，并通过使用基金会的智力价值和更广泛的评估被认为值得支持。影响审查标准。

项目成果

Abstract 1733: Metformin Degrading Bacteria: Genomes, Metabolic Products, and Transcriptional Regulation

摘要 1733：二甲双胍降解细菌：基因组、代谢产物和转录调控

• DOI: 10.1016/j.jbc.2023.103111
• 发表时间: 2023
• 期刊: Journal of Biological Chemistry
• 影响因子: 4.8
• 作者: Schultz, Anna;Dodge, Anthony;Lawrence, Wackett;Martinez-Vaz, Betsy
• 通讯作者: Martinez-Vaz, Betsy

Abstract 1745: Examining the Ability of Gut Bacteria to Metabolize Metformin

摘要 1745：检查肠道细菌代谢二甲双胍的能力

• DOI: 10.1016/j.jbc.2023.103113
• 发表时间: 2023
• 期刊: Journal of Biological Chemistry
• 影响因子: 4.8
• 作者: Magwaro, Lauryn;Aro, Hailee;Dodge, Anthony;Wackett, Lawrence;Martinez-Vaz, Betsy
• 通讯作者: Martinez-Vaz, Betsy