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Roles of regulation of DNA replication in genomic imprinting

Roles of regulation of DNA replication in genomic imprinting
DNA 复制调控在基因组印记中的作用
批准号:
14360206
负责人:
OKUMURA Katsuzumi
金额:
$10.62万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2002
资助国家:
日本
项目状态:
已结题
起止时间:
2002 至 2004

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中文摘要
翻译
染色质的表观遗传修饰在基因组印迹中起着重要作用。在这项研究中,首先开发了DNA复制分析的基本技术。利用新的和以前的技术,研究了染色质的表观遗传修饰对DNA复制的影响。得到的结果如下:1。应用低渗位移法将修饰的核苷酸引入细胞,分析DNA复制。与珠载法相反,这种方法不仅可用于贴壁细胞,也可用于漂浮细胞。其他优点包括修饰核苷酸的高效和均匀结合也被证明。建立了一种在显微镜盖片上精确均匀延伸DNA分子的动态分子梳理方法,并将其应用于DNA复制分析。研究了从单个细胞中制备半延伸DNA纤维的方法。结果表明,印迹区亲本等位基因间的异步复制率较高。DNA纤维的直接可视化显示,当复制叉穿过R/G染色体带边界和中心周围异染色质时,复制叉的运动速率通常在S期早期中期降低。研究还表明,组蛋白超乙酰化与染色质结构、复制时间(起始激发)和着丝点异染色质区分叉进程的变化密切相关。当核dna受损时,S期检查点因子被认为是抑制起始点发射和稳定复制叉的原因。核dna通常分别在其复制之前和之后与核基质结合和释放,尽管MAR区域始终通过S期与核基质结合。通过印迹结构域的复制时间分析、胚胎干细胞延伸的复制DNA纤维的可视化等,促进了表观遗传学中DNA复制在哺乳动物发育中的作用的基础研究。少
英文摘要
Epigenetic modifications of chromatin play important roles in genomic imprinting. In this research, basic techniques for the analysis of DNA replication were developed first. Using new and previous techniques, effects of epigenetic modifications of chromatin on DNA replication were examined. The results obtained are listed as follows :1.A hypotonic shift method to introduce modified nucleotides into cells was applied for the analysis of DNA replication. In contrast to the beads-loading method, this can be used not only for adherent cells but for floating cells. Other advantages including efficient and homogeneous incorporation of modified nucleotides were also demonstrated.2.A dynamic molecular combing method that extends DNA molecules precisely and uniformly on a microscope cover slip was established, and applied to analysis of DNA replication. A preparation method of semi-extended DNA fibers from individual cells was also developed. Using this method, asynchronous replication between … More parental alleles in imprinted regions was demonstrated.3.Direct visualization of DNA fibers showed that the rate of replication fork movement typically decreases in the early-mid S phase when the replication fork proceeds through the R/G chromosomal band boundary and pericentromeric heterochromatin. It was also shown that histone hyperacetylation is tightly associated with changes in chromatin structure, replication timing (origin firing) and fork progression of centromeric heterochromatin regions. S phase checkpoint factors were suggested to be responsible for repression of origin firing and stabilization of replication forks when nuclear DNAs were damaged.4.Nuclear DNAs generally bind and release to the nuclear matrix just before and after their replication, respectively, although MAR regions consistently bind to it through S phase.5.Basic researches to examine roles of DNA replication in epigenetics in mammalian development were promoted through replication timing analysis of imprinted domains, visualization of replicating DNA fibers extended from ES cells, and so on. Less
期刊论文(56)
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会议论文
DOI: 10.1093/dnares/11.5.325
发表时间: 2004-10-31
期刊: DNA RESEARCH
影响因子: 4.1
作者: [Shirohzu, H, Yokomine, T, Sasaki, H]
通讯作者: Sasaki, H
DOI: 10.1111/j.1365-2443.2005.00844.x
发表时间: 2005-05
期刊: Genes to Cells
影响因子: 2.1
作者: [M. Matsuyama;H. Mizusaki;A. Shimono;T. Mukai;K. Okumura;K. Abe;K. Shimada;K. Morohashi]
通讯作者: M. Matsuyama;H. Mizusaki;A. Shimono;T. Mukai;K. Okumura;K. Abe;K. Shimada;K. Morohashi
Structure and evolution of the mouse pregnancy-specific glycoprotein (Psg) gene locus
小鼠妊娠特异性糖蛋白(Psg)基因座的结构和进化
DOI: --
发表时间: 2005
期刊: BMC Genomics 6巻4号(印刷中)
影响因子: --
作者: [Matsumoto R., Ito Y., Shin-ichiro Takebayashi, Andrew S McLellan]
通讯作者: Andrew S McLellan
Wolfgang Zimmermann, Structure and Evolution of the Mouse Pregnancy-specific Glycoprotein (Psg) Gene Locus
Wolfgang Zimmermann,小鼠妊娠特异性糖蛋白 (Psg) 基因座的结构和进化
DOI: --
发表时间:
期刊: BMC Genomics (in press)
影响因子: --
作者: [Andrew S McLellan, et al.]
通讯作者: et al.
22
    Regulation of intranuclear arrangement of genes and construction of cells which highly express recombinant proteins
    • 批准号:
      23658091
    • 项目类别:
      Grant-in-Aid for Challenging Exploratory Research
    • 资助金额:
      $2.41万
    • 财政年份:
      2011
    • 负责人:
      OKUMURA Katsuzumi
    • 依托单位:
    General principle and importance of organization of chromosome structures during mammalian development and cell differentiation
    • 批准号:
      22380188
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $11.4万
    • 财政年份:
      2010
    • 负责人:
      OKUMURA Katsuzumi
    • 依托单位:
    Principle of organization of chromosome structures during mammalian development and cell differentiation
    • 批准号:
      18380198
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $11.17万
    • 财政年份:
      2006
    • 负责人:
      OKUMURA Katsuzumi
    • 依托单位:
    Analysis of Intranuclear Communication of Homologous Alleles of Imprinted Genes and Transgenes
    • 批准号:
      11660086
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $2.3万
    • 财政年份:
      1999
    • 负责人:
      OKUMURA Katsuzumi
    • 依托单位:
    海外基金