Sequence specific double-strand DNA cleavage by an optical active dinuclear iron complex and application for artificial restriction enzyme

光学活性双核铁复合物对序列特异性双链 DNA 的切割及其人工限制性内切酶的应用

基本信息

  • 批准号:
    14572034
  • 负责人:
  • 金额:
    $ 2.18万
  • 依托单位:
  • 依托单位国家:
    日本
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
  • 财政年份:
    2002
  • 资助国家:
    日本
  • 起止时间:
    2002 至 2003
  • 项目状态:
    已结题

项目摘要

1-1)In my approach to create metal complexes that are capable of cleaving double-strand DNA simultaneously and sequence-selectively (like bleomycin, which is an antitumor antibiotic which causes single and double strand cleavage of DNA at 5'-GC-3' or 5'-GT-3' sites), I prepared an optical active pentadentate ligand, N,N,N'-tri(2-pyridylmethyl)-2-S-(aminomethyl)piperidine = S-P3pipda obtained from the reaction of S-2-aminopiperidine with 3 equimolar amounts of 2-chloromethylpyridine, and investigated the X-ray crystal structures of copper(II) and nickel(II) complexes of S-P3pipda, [Cu(S-P3pipda)](ClO_4)_2 and [Ni(S-P3pipda)(OH_2)](ClO_4)_2 Complexes, [Cu(S-P3pipda)](ClO_4)_2 and [Ni(S-P3pipda)(OH_2)](ClO_4)_2, were prepared from the reaction of an equimolar amount of Cu(ClO_4)_2・6H_2O or Ni(SO_4)_2・6H_2O (followed by addition of LiClO_4) with the ligand S-P3pipda in methanol under argon.The X-ray crystal structure of [Cu(S-P3pida)]^<2+> shows an intermediate structure between trigonal bipyramid and square pyramid in which equatrial positions are occupied by two tertiary amines (N2 and N3) and two pyridine nitrogens (N1 and N4) and axial position by a pyridine nitrogen (N5). Perchlorate ion coordinates weakly : Cu-O is 3.55 Å.1-2)We synthesized 1,8-(N-anthranylmethyl)-bis(N',N'-dipyridylmethyl-R,R-cyclohexane-1,2-diamine), 1, and cleaving activity of 1 to DNA was evaluated in the presence of sodium ascorbate under air. A novel Fe complex 1 and sodium ascorbate system cleaved A-T rich region of DNA.2)Moreover, I have synthesized two new dinuclear platinum(II) complexes, 1,3-and 1,4-(benzenedimethanethiolate-S)di(2,2',2"-terpyridine)platinum(II) chloride tetrahydrate (2 and 3), were synthesized in order to investigate the binding of platinum(II) complexes with calf thymus DNA, which was examined by UV and CD spectroscopies. Complex 2 interacted strongly with DNA by intercalation compared to 3.
1-1)在我创建能够同时和序列选择性地切割双链DNA的金属络合物的方法中,(像博来霉素,它是一种抗肿瘤抗生素,在5’-GC-3’或5’-GT-3’位点引起DNA的单链和双链切割),我制备了光学活性五齿配体,N,N,N'-tri(2-吡啶甲基)-2-S-(氨甲基)哌啶= S-P3 pipda,由S-2-氨基哌啶与3个等摩尔量的2-氯甲基吡啶反应获得,并研究了S-P3 pipda的铜(II)和镍(II)络合物的X射线晶体结构,[铜(S-P3pipda)](ClO_4)_2和[Ni(S-P3 pipda)(OH_2)](ClO_4)_2配合物(S-P3pipda)](ClO_4)_2和[Ni(S-P3pipda)(OH_2)](ClO_4)_2,等摩尔的Cu(ClO_4)_2·6H_2O或Ni(SO_4)_2·6H_2O反应制得(然后加入LiClO_4)与配体S-P3 pipda在甲醇中在氩气保护下反应。(S-P3 pida)]^<2+>显示了一种介于三角双锥和正方锥之间的中间结构,其中两个叔胺占据了四分之一的位置(N2和N3)和两个吡啶氮(N1和N4)以及轴向位置由一个吡啶氮(N5)组成。1 -2)我们合成了1,8-(N-蒽基甲基)-双(N ′,N ′-二吡啶基甲基-R,R-环己烷-1,2-二胺),1,并在抗坏血酸钠存在下在空气中评价了1对DNA的切割活性。本文还合成了两个新的双核铂(II)配合物:1,3-和1,4-硫代苯二甲酰二胺合成了氯化(2,2 ',2”-三联吡啶)铂(II)四水合物(2和3),以研究铂(II)配合物与小牛胸腺DNA的结合,用紫外光谱和圆二色光谱对其进行了分析。配合物2与DNA通过嵌入作用相互作用较强。

项目成果

期刊论文数量(15)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Masafumi Goto, Yasuhiko Ohse, Sayuri Koga, Yuka Kudo, Rinko Kukihara, Hiromasa Kurosaki: "Preparations of Low-Spin Tetra Cyano Iron Complexes of N-Benzyl-1,2-ethanediamine and Its Oxidative Dehydrogenation : Isolation of the Intermediate with Monoimine Li
Masafumi Goto、Yasuhiko Ohse、Sayuri Koga、Yuka Kudo、Rinko Kukihara、Hiromasa Kurosaki:“N-苄基-1,2-乙二胺的低自旋四氰基铁配合物的制备及其氧化脱氢:用单亚胺锂分离中间体
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Hiromasa Kurosaki, Toshiaki Tawada, Satomi Kawasoe, Yoko Ohashi, Masafumi Goto: "Crystal Sturucture of Chloro{N-mercaptoethyl[bis(6-methyl-2-pyridyl-methyl)amine]}zinc(II) Complex"Anal. Sci.. 19. x27-x28 (2003)
Hiromasa Kurosaki、Toshiaki Tawada、Satomi Kawasoe、Yoko Ohashi、Masafumi Goto:“氯{N-巯基乙基[双(6-甲基-2-吡啶基-甲基)胺]}锌(II)络合物的晶体结构”分析。
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Masafumi Goto, Yuuichiro Yamamoto, Masamisu Sumimoto, Nobuhiro Tsuruda, Hiromasa Kurosaki: "Conformation of 2-Aminomethylpyrrolidine and 2-Aminomethylpiperidine in Ternary Platinum(II) Complexes : Regulation of Conformation of the Diamine by the Coexistin
Masafumi Goto、Yuuichiro Yamamoto、Masamisu Sumimoto、Nobuhiro Tsuruda、Hiromasa Kurosaki:“三元铂 (II) 配合物中 2-氨基甲基吡咯烷和 2-氨基甲基哌啶的构象:共存蛋白对二胺构象的调节
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Masafumi Goto: "Interaction of Binuclear Xylylthiolato(2,2',2"-terpyridine)platinum(II) Complexes with DNA"Bioorg.Med.Chem.Lett.. 13. 825-828 (2003)
Masafumi Goto:“双核二甲苯硫基(2,2,2”-三联吡啶)铂(II)复合物与DNA的相互作用”Bioorg.Med.Chem.Lett.. 13. 825-828 (2003)
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
Masafumi Goto: "DNA Cleavage by Pentadentate Iron(II) Complexes Containing Fluoro-Substituted Phenyl Groups"Bioorg.Med.Chem.Lett.. 12. 201-203 (2002)
Masafumi Goto:“含有氟取代苯基的五齿铁 (II) 配合物对 DNA 的切割”Bioorg.Med.Chem.Lett.. 12. 201-203 (2002)
  • DOI:
  • 发表时间:
  • 期刊:
  • 影响因子:
    0
  • 作者:
  • 通讯作者:
{{ item.title }}
{{ item.translation_title }}
  • DOI:
    {{ item.doi }}
  • 发表时间:
    {{ item.publish_year }}
  • 期刊:
  • 影响因子:
    {{ item.factor }}
  • 作者:
    {{ item.authors }}
  • 通讯作者:
    {{ item.author }}

数据更新时间:{{ journalArticles.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ monograph.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ sciAawards.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ conferencePapers.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ patent.updateTime }}

KUROSAKI Hiromasa其他文献

KUROSAKI Hiromasa的其他文献

{{ item.title }}
{{ item.translation_title }}
  • DOI:
    {{ item.doi }}
  • 发表时间:
    {{ item.publish_year }}
  • 期刊:
  • 影响因子:
    {{ item.factor }}
  • 作者:
    {{ item.authors }}
  • 通讯作者:
    {{ item.author }}

{{ truncateString('KUROSAKI Hiromasa', 18)}}的其他基金

Development of inhibitors based on the molecular structure and mechanism of substrate hydrolysis by metallo-beta-lactamases
基于金属-β-内酰胺酶底物水解的分子结构和机制开发抑制剂
  • 批准号:
    26460147
  • 财政年份:
    2014
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Development of fluorescent probes for metallo-beta-lactamase-producing Gram-negative bacteria
产金属-β-内酰胺酶革兰氏阴性菌荧光探针的开发
  • 批准号:
    24659054
  • 财政年份:
    2012
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Challenging Exploratory Research
Development of irreversible inhibitors forβ-lactam inactived enzyme, metallo-β-lactamase
β-内酰胺失活酶、金属-β-内酰胺酶不可逆抑制剂的开发
  • 批准号:
    21590116
  • 财政年份:
    2009
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Structure-based Design of Selective metallo-β-lactamase
基于结构的选择性金属-β-内酰胺酶设计
  • 批准号:
    18390038
  • 财政年份:
    2006
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Development of functional molecules capable of recognizing and cleaving the bulge structure in DNA by using an optical active dinuclear iron complex
利用光学活性双核铁络合物开发能够识别和切割 DNA 凸起结构的功能分子
  • 批准号:
    16590031
  • 财政年份:
    2004
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)

相似海外基金

Novel, synthetic gene editing technology for gene knock-ins without DNA cleavage
新颖的合成基因编辑技术,无需 DNA 切割即可进行基因敲入
  • 批准号:
    10060261
  • 财政年份:
    2023
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Collaborative R&D
Characterization of structural elements controlling Cas9-mediated DNA cleavage and single-turnover enzyme kinetics.
控制 Cas9 介导的 DNA 切割和单周转酶动力学的结构元件的表征。
  • 批准号:
    10461615
  • 财政年份:
    2023
  • 资助金额:
    $ 2.18万
  • 项目类别:
Mechanistic investigation of DNA cleavage and specificity in CRISPR-Cas9
CRISPR-Cas9 中 DNA 切割和特异性的机制研究
  • 批准号:
    1905374
  • 财政年份:
    2019
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Continuing Grant
Structural basis of DNA cleavage by FokI restriction enzyme
FokI 限制性酶切 DNA 的结构基础
  • 批准号:
    18K04859
  • 财政年份:
    2018
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
RUI: Elucidating the mechanisms of site specific DNA cleavage using single molecule methods
RUI:利用单分子方法阐明位点特异性 DNA 切割的机制
  • 批准号:
    1715317
  • 财政年份:
    2017
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Standard Grant
Mechanism of targeted DNA cleavage and recombination by AID
AID 靶向 DNA 切割和重组的机制
  • 批准号:
    16K07214
  • 财政年份:
    2016
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
Characterizing the function of pUL33 of HSV-1 in viral DNA cleavage and packaging
表征 HSV-1 的 pUL33 在病毒 DNA 切割和包装中的功能
  • 批准号:
    8883366
  • 财政年份:
    2014
  • 资助金额:
    $ 2.18万
  • 项目类别:
Protein Filament Formation in Activating and Modulating Enzymatic DNA Cleavage Specificity
激活和调节 DNA 酶切特异性中的蛋白丝形成
  • 批准号:
    1410355
  • 财政年份:
    2014
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Standard Grant
Characterizing the function of pUL33 of HSV-1 in viral DNA cleavage and packaging
表征 HSV-1 的 pUL33 在病毒 DNA 切割和包装中的功能
  • 批准号:
    8914900
  • 财政年份:
    2014
  • 资助金额:
    $ 2.18万
  • 项目类别:
CRISPR-mediated DNA cleavage by the CSM complex
CSM 复合物介导的 CRISPR 介导的 DNA 切割
  • 批准号:
    BB/M000400/1
  • 财政年份:
    2014
  • 资助金额:
    $ 2.18万
  • 项目类别:
    Research Grant
{{ showInfoDetail.title }}

作者:{{ showInfoDetail.author }}

知道了