Research of Enzymes Involved in Metabolism of Organic Sulfur Compounds -Improvement by Protein Engineering and Search of Novel Functions-

有机硫化合物代谢相关酶的研究-蛋白质工程改良及新功能探索-

基本信息

  • 批准号:
    16580058
  • 负责人:
  • 金额:
    $ 2.43万
  • 依托单位:
  • 依托单位国家:
    日本
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)
  • 财政年份:
    2004
  • 资助国家:
    日本
  • 起止时间:
    2004 至 2006
  • 项目状态:
    已结题

项目摘要

The structure of 2'-hydroxybiphenyl 2-sulfinate desulfinase (DszB) from Rhodococcus erythropolis, the moderately desulfurization bacterium, has been elucidated, and that of the enzyme-substrate complex has been also revealed. This is the first report about the three dimensional structure among dibenzothiophene (DBT) desulfurizing enzymes. The enzyme structure changed by incorporating the substrate, 2'-hydroxybiphenyl 2-sulfinate, and His 60 residue moved into the catalytic center. Based upon the structure of DszB, the site-directed mutagenesis was performed to improve the enzyme property. It was found that some mutant enzymes had higher thermal stability than the wild-type enzyme.The strain, Bacillus subtilis WU-S2B, is the thermophilic desulfurizing bacterium, which could grow up to 50℃. The enzymes (BdsC, BdsA, BdsB) involved in DBT metabolism were purified to homogeneity, the overproducing E.coli strains were constructed, and their enzymatic properties were investigated. Since we estimated the activity of BdsC toward several aromatic compounds and found out that BdsC utilize indole as a substrate. This result shows that BdsC catalyzes the reactions of compounds without the DBT skeleton, and it is the new function of the desulfurizing enzymes.In order to perform the microbial desulfurization at higher temperature, we purified flavin reductase from the thermophilic strain, Bacillus sp.DSM411. We obtained the corresponding gene and overproduce the enzyme with the recombinant E.coli strain. The productivity was 440 fold higher than the wild-type strain. The efficient reaction coupled with BdsC was confirmed.
本文报道了红平红球菌(Rhodococcus erythropolis)的2 ′-羟基联苯-2-亚磺酸酯酰化酶(DszB)的结构,以及酶-底物复合物的结构。这是首次报道二苯并噻吩(DBT)还原酶的三维结构。酶的结构发生了变化,通过纳入底物,2 '-羟基联苯2-亚磺酸酯,和His 60残基移动到催化中心。根据DszB的结构,进行定点突变,以提高酶的性质。结果表明,突变菌株的热稳定性比野生型酶高,其中枯草芽孢杆菌WU-S2 B是一株嗜热芽孢杆菌,可在50℃下生长。对DBT代谢相关酶(BdsC、BdsA、BdsB)进行了纯化,构建了高产菌株,并对其酶学性质进行了研究。由于我们测定了BdsC对几种芳香族化合物的活性,发现BdsC以吲哚为底物。这一结果表明,BdsC催化不含DBT骨架的化合物的反应,这是脱硫酶的新功能。为了在更高温度下进行微生物脱硫,我们从嗜热菌株Bacillussp. DSM 411中纯化了黄素还原酶。我们获得了相应的基因,并利用重组菌株进行了高产。产率比野生型菌株高440倍。证实了与BdsC偶联的有效反应。

项目成果

期刊论文数量(31)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Reaction of serine-glyoxylate aminotransferase with the alternative substrate ketomalonate indicates rate-limiting protonation of a quinonoid intermediate
  • DOI:
    10.1021/bi051407p
  • 发表时间:
    2005-12-06
  • 期刊:
  • 影响因子:
    2.9
  • 作者:
    Karsten, WE;Ohshiro, T;Cook, PF
  • 通讯作者:
    Cook, PF
Crystallization and preliminary X-ray analyses of desulfurization enzyme DszB and its C27S mutant complexed with biphenyl-2-sulfinic acid
脱硫酶DszB及其C27S突变体与联苯-2-亚磺酸络合的结晶及初步X射线分析
  • DOI:
  • 发表时间:
    2004
  • 期刊:
  • 影响因子:
    0
  • 作者:
    W.C.Lee;T.Ohshiro;T.Matsubara;Y.Izumi;M.Tanokura
  • 通讯作者:
    M.Tanokura
Thermostable Flavin Reductase That Couples with Dibenzothiophene Monooxygenase, from Thermophilic Bacillus sp. DSM411: Purification, Characterization, and Gene Cloning
  • DOI:
    10.1271/bbb.68.1712
  • 发表时间:
    2004-01
  • 期刊:
  • 影响因子:
    0
  • 作者:
    T. Ohshiro;H. Yamada;T. Shimoda;Toshiyuki Matsubara;Y. Izumi
  • 通讯作者:
    T. Ohshiro;H. Yamada;T. Shimoda;Toshiyuki Matsubara;Y. Izumi
Crystal structure and desulfurization mechanism of 2'-hydroxybipheny1-2-sulfinic acid desulfinase
2-羟基联苯1-2-亚磺酸脱硫酶的晶体结构及脱硫机理
  • DOI:
  • 发表时间:
    2006
  • 期刊:
  • 影响因子:
    0
  • 作者:
    W.C.Lee;T.Ohshiro;T.Matsubara;Y.Izumi;M.Tanokura
  • 通讯作者:
    M.Tanokura
Enhancing effect of calcium and vanadium ions on thermal stability of bromoperoxidase from Corallina pilulifera
钙、钒离子对珊瑚虫溴过氧化物酶热稳定性的增强作用
  • DOI:
  • 发表时间:
    2005
  • 期刊:
  • 影响因子:
    0
  • 作者:
    E.Garcia-Rodriguez;T.Ohshiro;T.Aibara;Y.Izumi;J.Littlechild
  • 通讯作者:
    J.Littlechild
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OHSHIRO Takashi其他文献

OHSHIRO Takashi的其他文献

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{{ truncateString('OHSHIRO Takashi', 18)}}的其他基金

Studies on enzymes for organic sulfur compounds-cleavage and formation of carbon-sulfur bond
有机硫化合物酶的研究——碳硫键的断裂和形成
  • 批准号:
    19580091
  • 财政年份:
    2007
  • 资助金额:
    $ 2.43万
  • 项目类别:
    Grant-in-Aid for Scientific Research (C)

相似海外基金

Purification of a desulfinase for biodegradation of fluorinated organic contaminants
用于氟化有机污染物生物降解的脱硫酶的纯化
  • 批准号:
    508978-2017
  • 财政年份:
    2017
  • 资助金额:
    $ 2.43万
  • 项目类别:
    University Undergraduate Student Research Awards
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