Comparative genome study on evolution and diversity of lower plants

低等植物进化和多样性的比较基因组研究

• 批准号: 17018020
• 负责人: FUKUZAWA Hideya
• 金额: $ 71.94万
• 依托单位: Kyoto University
• 依托单位国家: 日本
• 项目类别: Grant-in-Aid for Scientific Research on Priority Areas
• 财政年份: 2005
• 资助国家: 日本
• 起止时间: 2005 至 2009
• 项目状态: 已结题
• 来源: https://kaken.nii.ac.jp/en/grant/KAKENHI-PROJECT-17018020/
• 关键词: 光合成; 環境応答; 生殖; 緑藻; 苔類; 鮮類; ゲノム; 次世代シーケンサー; 蘚類; 二酸化炭素; 蘚苔類; 形態形成; 完全長Cdna; コケ植物; 完全長cDNA; 緑藻クラミドモナス; ゼニゴケY染色体; ヒメツリガネゴケ; 完全長cDNAライブラリ; 遺伝子発現プロファイル; 低温順化; 生殖器官; 発生; 発生分化; 適応進化; 藻クラミドモナス; 性染色体

By determining sequences of newly established genomic libraries (BAC and FOSMID) of Chlamydomonas reinhardtii, we have identified new genes on the genomic R-domain regions responsible to the sex determination. We have developed genome viewers which display the detail information on locations of EST, BAC, FOSMID clones as well as the Illumina or SOLid short reads (36-76 nucleotide) on the chromosomes of Chlamydomonas reinhardtii as well as of a moss, Physcomitrella patenswas. Functions of CO_2-responsive proteins and CO_2-signal transduction pathway was. EST and SNPs/SSRs markers were isolated from a liverwort, Marchantia polymorpha. Genes for morphogenesis were phylogenetically analyzed, revealed the evolution of land plants.

通过测定新建立的莱茵衣藻基因组文库（BAC 和 FOSMID）的序列，我们在基因组 R 结构域区域上鉴定了负责性别决定的新基因。我们开发了基因组查看器，可显示 EST、BAC、FOSMID 克隆位置的详细信息，以及莱茵衣藻和苔藓植物小立碗藓染色体上的 Illumina 或 SOLid 短读段（36-76 个核苷酸）。 CO_2反应蛋白和CO_2信号转导途径的功能。 EST 和 SNP/SSR 标记是从地钱（地钱）中分离出来的。对形态发生的基因进行了系统发育分析，揭示了陆地植物的进化。

项目成果

Microtubule-dependent microtubule nucleation in plant cells

• DOI: 10.1007/s10265-006-0054-z
• 发表时间: 2007-01-01
• 期刊: JOURNAL OF PLANT RESEARCH
• 影响因子: 2.8
• 作者: Murata, Takashi;Hasebe, Mitsuyasu
• 通讯作者: Hasebe, Mitsuyasu

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

• DOI: 10.1126/science.1150646
• 发表时间: 2008-01-04
• 期刊: SCIENCE
• 影响因子: 56.9
• 作者: Rensing, Stefan A.;Lang, Daniel;Boore, Jeffrey L.
• 通讯作者: Boore, Jeffrey L.

Genes for the peptidoglycan synthesis pathway are essential for chloroplast division in moss

• DOI: 10.1073/pnas.0510693103
• 发表时间: 2006-04-25
• 期刊: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
• 影响因子: 11.1
• 作者: Machida, M;Takechi, K;Takano, H
• 通讯作者: Takano, H

Gene organization of the liverwort Y chromosome reveals distinct sex chromosome evolution in a haploid system

• DOI: 10.1073/pnas.0609054104
• 发表时间: 2007-04-10
• 期刊: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
• 影响因子: 11.1
• 作者: Yamato, Katsuyuki T.;Ishizaki, Kimitsune;Ohyama, Kanji
• 通讯作者: Ohyama, Kanji

Production of arachidonic and eicosapentaenoic acids in plants using bryophyte fatty acid delta6-desaturase, delta6-elongase, and delta5-desaturase genes

使用苔藓植物脂肪酸δ6-去饱和酶、δ6-延长酶和δ5-去饱和酶基因在植物中生产花生四烯酸和二十碳五烯酸

• 发表时间: 2008
• 期刊: Biosci. Biotechnol. Biochem 72
• 作者: Kajikawa M;他
• 通讯作者: 他