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The study of molecular phylogeny and pedigree preservation in marine macroalgae

The study of molecular phylogeny and pedigree preservation in marine macroalgae
海洋大型藻类的分子系统发育和谱系保存研究
批准号:
09660212
负责人:
SAGA Naotsune
金额:
$1.98万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
1997
资助国家:
日本
项目状态:
已结题
起止时间:
1997 至 1998

项目摘要

项目成果

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中文摘要
翻译
在本项目中,我们展示了爱胜门(Laminariales,菲藻门)和Enierornorplia(Ulvales,Chiorophyta)的克隆化保存和紫菜的分子系统发育。这些结果总结如下:1)我们尝试在液氮中超低温保存赤子爱胜子和爱默子的配子体。这一结果表明,紫菜的存活率与以前建立的紫菜属红藻的冷冻保存技术没有太大差异。2)对烟草赤霉菌(TU-3、T-1、T-8)和条斑病菌(TU-1)的SSU rDNA序列进行了分析。这一结果表明条斑病菌TU-1与条斑病菌TU-3关系密切,而条斑病菌T-1和T-8是条斑病菌TU-1和条斑病菌TU-3.3的姊妹群。分支分析的表型数据分解了两个不同的群体,在突触形态的基础上,“生殖细胞的排列”,其中一个进一步分为两个群体。我们在紫菜中新测定了9个SSU rDNA全序列。基于SSU rDNA的系统发育分析表明,紫菜分为两个类群,其中一个类群进一步分为三个类群,这些研究取得了很好的结果。近年来,多态序列(GT)n和(CAC)n广泛分布于凤眼莲中。我们还通过斑点杂交证实了这些核苷酸重复序列。目前,我们正在构建条斑病菌Tu-L基因组文库,并用(GT)10和(CAC)10寡核苷酸探针筛选这些核苷酸重复序列。
英文摘要
In the present project, we have demonstrated clyopreservation of Eisenia (Laminariales, Pheophyta) and Enierornorplia (Ulvales, Chiorophyta) and molecular phylogeny of Porphyra. These results are summarized as follows : 1) We attempted to cryopreserve the gametophyte of Eisenia and Emeroinorpha in liquid nitrogen. This result indicated that survival rates were not extremely different from red algal genus Porphyra in which the cryopreserved techniques were established previously. 2) We analyzed SSU rDNA sequences of P.tenera (TU-3, T-1 and T-8) and P.yezoensis (TU-1). This result suggested that P.yezocnsis TU-1 was closely related to P.tenera TU-3 and P.tenera T-1 and T-8 were sister group to P.yezoensis TU-1 and P.frnera TU-3.3) We investigated phylogenetic relationship on the basis both for cladistic analysis of the phenotypic data and molecular phylogeny of SSU rDNA data. Cladistic analysis of the phenotypic data resolved two distinct groups, on the basis of synapomorphy, "arrangement of reproductive cells" and one of them was further divided into two groups. We newly determined nine complete sequences of SSU rDNA in Porphyra. Phylogenetic analysis based on the SSU rDNA indicated that Porphyra divided into two groups and one of them was further divided into three groups.These studies obtained excellent results. Recently, it was reported that polymorphic sequences (GT)n and (CAC)n are widely interspersed in Poiphyra. We also confirmed these nucleotide repeats by using the dot blot hybridization. At present, we are constructing a genomic plasmid library from P.yezoensis TU-l and al-c screening these nucleotide repeats with (GT)10 and (CAC)10 oligonucleotide probes.
期刊论文(28)
专著(0)
科研奖励(0)
会议论文
S.Yamazaki, K.Shimomura, N.Saga: "Review : Morphological and Embryological Characters and Phylogeny Inferred from Cladistic Analysis of the Marine Red Algal Genus Porphyra. (in Japanese)" Bull.Inst.Oceanic Res.Develop., Tokai Univ.20 : (in press). (1999)
S.Yamazaki、K.Shimomura、N.Saga:“综述:从海洋红藻属紫菜的分支分析推断出形态学和胚胎学特征以及系统发育。(日语)”Bull.Inst.Oceanic Res.Develop.,东海大学
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K.Shimomura, S.Fukuda, T.Miyata, N.Saga: "A preliminary study on phylogenetic position of Bargia atropurputoa strain OM-1 (Barg ialos, Rhadc・phyta) based on the SSU rDNA sequence." Bull, Inst.Oceanic Res.Develop., Tokai Univ.20. in press (1999)
K. Shimomura、S. Fukuda、T. Miyata、N. Saga:“基于 SSU Bull、Inst. 的 Barg ialos、Rhadc·phyta 菌株 OM-1 的系统发育位置的初步研究。”海洋资源开发,东海大学 20 版(1999 年)
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S.Kono, K.Kuwano, M.Ninomiya J.Onish, N.Saga: "Cryopreseruation of Enteromorpha intestinalis (Uliales, Chlorophyta) in liquid nitrogen." Phycologia. 36. 76-78 (1997)
S.Kono、K.Kuwano、M.Ninomiya J.Onish、N.Saga:“在液氮中冷冻保存肠浒苔(Uliales、绿藻门)。”
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S>Yamazaki,K.Shimomura J.A.Shin,N.Saga: "The-taxonomicposition based on the 18 Sribosoma/DNA in Porphyra tenera (Bangiaks,Rhodophyta)." Proc.Intl.Mar.Biotech.Conf.4. -240 (1997)
S>Yamazaki,K.Shimomura J.A.Shin,N.Saga:“基于紫菜(Bangiaks,红藻门)中 18 个 Sribosoma/DNA 的分类位置。”
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共 28 条
    Research on the molecular mechanism of the complementary chromatic adaptation in model algae Porphyra yezoensis
    • 批准号:
      21580213
    • 项目类别:
      Grant-in-Aid for Scientific Research (C)
    • 资助金额:
      $3.16万
    • 财政年份:
      2009
    • 负责人:
      SAGA Naotsune
    • 依托单位:
    Gene expression analysis related to regulation of life cycle using Porphyra genomic information
    • 批准号:
      15380126
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $8.77万
    • 财政年份:
      2003
    • 负责人:
      SAGA Naotsune
    • 依托单位:
    STUDIES ON STRAIN-PRESERVATION AND FUNCTION-DEVELOPMENT OF AQUATIC PLANTS
    • 批准号:
      03454086
    • 项目类别:
      Grant-in-Aid for General Scientific Research (B)
    • 资助金额:
      $3.71万
    • 财政年份:
      1991
    • 负责人:
      SAGA Naotsune
    • 依托单位:
    海外基金