X-ray Crystallographic Analysis of Bacteriophage Precursor Structures
X-ray Crystallographic Analysis of Bacteriophage Precursor Structures
批准号:
10044070
负责人:
ARISAKA Fumio
金额:
$1.54万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B).
财政年份:
1998
资助国家:
日本
项目状态:
已结题
起止时间:
1998 至 1999
中文摘要
As a step toward determination of the structure of the baseplate of bacteriophage T4 in atomic resolution,three precursor structures were chosen for crystallization,One of them was the initiation complex of the wedge of the baseplate,gp10-gp11complex。It is considered to constitute the tail pins at the vertices of the hexagonal baseplate,which protrude from the bottom of the baseplate。Based on SDS-PAGE,Edman degradation of the complex and analytical ultracentrifugation,it was shown that the-complex is a hetero-hexamer with the subunit composition of(Gp10)I D23 I D 2(Gp11)Crystal of the complex suitable for X-ray analysis has not been obtained although small crystalls have been found。On the other hand,the second target for X-ray crystal analysis,i.e.,gp5-gp27complex,has been crystallized。Based on the results of sedimentation equilibrium and SDS-PAGE,the subunit structure of the complex was concluded to be hetero-nanomer,(Gp5)I D 23 I D 2(Gp 27)I D 26 I D 2.The crystal yielded the resolution of approximately2.5A.At present,efforts are made to obatain isomorphous crystal containing selenomethionine。Gp5is a structurally essential component,yet possesses lysozyme domain which locally digests peptidoglycan of the host E.coli upon infection so that the tail tube can reach the inner membrane.Concerning the third target protein,crystal has not been obtained,but we have recently succeeded in expressing a mutant protein which lacks the N-terminal seven residues that contain five negative charges.The mutant protein was shown to retain the native secondary and oligomeric structure.We plan to examine the possibility of crystallization of the mutant protein。
英文摘要
As a step toward determination of the structure of the baseplate of bacteriophage T4 in atomic resolution, three precursor structures were chosen for crystallization, One of them was the initiation complex of the wedge of the baseplate, gp10-gp11 complex. It is considered to constitute the tail pins at the vertices of the hexagonal baseplate, which protrude from the bottom of the baseplate. Based on SDS-PAGE, Edman degradation of the complex and analytical ultracentrifugation, it was shown that the-complex is a hetero-hexamer with the subunit composition of (gp10)ィイD23ィエD2 (gp11)ィイD23ィエD2. Crystal of the complex suitable for X-ray analysis has not been obtained although small crystalls have been found. On the other hand, the second target for X-ray crystal analysis, i.e., gp5-gp27 complex, has been crystallized. Based on the results of sedimentation equilibrium and SDS-PAGE, the subunit structure of the complex was concluded to be hetero-nanomer, (gp5)ィイD23ィエD2(gp27)ィイD26ィエD2. The crystal yielded the resolution of approximately 2.5 A. At present, efforts are made to obatain isomorphous crystal containing selenomethionine. Gp5 is a structurally essential component, yet possesses lysozyme domain which locally digests peptidoglycan of the host E. coli upon infection so that the tail tube can reach the inner membrane. Concerning the third target protein, crystal has not been obtained, but we have recently succeeded in expressing a mutant protein which lacks the N-terminal seven residues that contain five negative charges. The mutant protein was shown to retain the native secondary and oligomeric structure. We plan to examine the possibility of crystallization of the mutant protein.
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Shuji KANAMARU: "C-terminal Fragment of the Precursor Tail Lysozyme of Bacteriophage T4 Stays as a Strucutral Component of the Baseplate after Cleavage"J. Bacteriology. 181. 2739-2744 (1999)
Shuji KANAMARU:“噬菌体 T4 前体尾部溶菌酶的 C 末端片段在裂解后仍作为底板的结构成分”J。
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通讯作者:
Li ZHAO: "Socichiometry and Inter-subunit Interaction of the Wedge Initiation Complex, Gp10-gp11 of Bacteriophage T4"Biochim. Biophys. Acta. (in press).
赵力:“噬菌体 T4 的楔形起始复合体 Gp10-gp11 的社会计量学和亚基间相互作用”Biochim。
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有坂文雄: "超遠心分析の基礎と新たな展開(2)" 蛋白質核酸酵素. 43(14). 2145-2152 (1998)
Fumio Arisaka:“超速离心分析的基础知识和新进展 (2)”蛋白质核酸酶 43(14) (1998)。
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通讯作者:
Li ZHAO: "Stoichimetry and Inter-subunit Interaction of the Wedge Initiation Complex, Gp 10-gp11 Bactriophage T4"Biochim. Biophys. Acta. (in press).
赵力:“楔形引发复合物 Gp 10-gp11 噬菌体 T4 的化学计量和亚基间相互作用”Biochim。
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Kei-ichiro INAMORI: "A Newly Identified Horseshoe Crab Lectin with Specificity for Blood Group A Antigen Recognizes Specific O-Antigens of Bacterial Lipopolysaccharides"J. Biol. Chem.. 274. 3272-3278 (1999)
Kei-ichiro INAMORI:“一种新鉴定的具有 A 血型抗原特异性的鲎凝集素可识别细菌脂多糖的特异性 O 抗原”J.
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共 22 条
Structure and assembly of the central hub of the baseplate of bacteriophage T4
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批准号:23570190
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$3.49万
-
财政年份:2011
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负责人:ARISAKA Fumio
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依托单位:
Structure Formation of the Neck which Links the Head and the Tail of Bacteriophage
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批准号:18570147
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.63万
-
财政年份:2006
-
负责人:ARISAKA Fumio
-
依托单位:
Assembly and Mechanism of Infection of Bacteriophage
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批准号:16087204
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$58.75万
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财政年份:2004
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负责人:ARISAKA Fumio
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依托单位:
Structure and Assembly of the Contractile Tail of Bacteriophage
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批准号:15370065
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.54万
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财政年份:2003
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负责人:ARISAKA Fumio
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依托单位:
Architecture and Principle of Formation of the Baseplate of Bacteriophage T4
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批准号:13680736
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.3万
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财政年份:2001
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负责人:ARISAKA Fumio
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依托单位:
Architecture and Principle of Formation of the Baseplate of Bacteriophage T4
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批准号:10480178
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项目类别:Grant-in-Aid for Scientific Research (B).
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资助金额:$4.93万
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财政年份:1998
-
负责人:ARISAKA Fumio
-
依托单位:
Molecular Assembly and the role in infection of Tail-lysozyme from bacteriophage T4.
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批准号:07680712
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$1.41万
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财政年份:1995
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负责人:ARISAKA Fumio
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依托单位:
Analyses of the Relationship between Amino Acid Substitution and Phenotype of the Tail Sheath Protein of Bacteriophage T4
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批准号:02680125
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.28万
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财政年份:1990
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负责人:ARISAKA Fumio
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依托单位: