Comprehensive phenotypic analysis of yeast gene perturbation libraries and development of prediction system
Comprehensive phenotypic analysis of yeast gene perturbation libraries and development of prediction system
批准号:
20700270
负责人:
FURUSAWA Chikara
金额:
$2.83万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Young Scientists (B)
财政年份:
2008
资助国家:
日本
项目状态:
已结题
起止时间:
2008 至 2009
中文摘要
细胞表型如何通过基因修饰改变的问题对于工业用途所需微生物的合理设计是重要的。在此,我们综合分析了酵母菌株在单基因缺失文库和单基因过表达文库中的表型变化。在此基础上,我们发现了对基因扰动具有鲁棒性和脆弱性的基因功能类别,并分析了表达变化与基因扰动响应之间的相关性。
英文摘要
A question how cellular phenotype changes by genetic modifications is important for rational design of desired microorganisms for industrial purpose. Here, we comprehensively analyzed the phynotypic changes of yeast strains in single gene deletion library and single gene overexpression library. Based on the data, we found gene functional categories which are robust or fragile for the gene perturbations, and we also analyzed the correlation between expression changes and response to the gene perturbations.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
登录
查看更多内容
DOI:
10.1016/j.biosystems.2008.09.002
发表时间:
2009-03-01
期刊:
BIOSYSTEMS
影响因子:
1.6
作者:
[Hogiri, Tomoharu, Furusawa, Chikara, Shimizu, Hiroshi]
通讯作者:
Shimizu, Hiroshi
DOI:
10.1007/s00449-008-0292-7
发表时间:
2009-08-01
期刊:
BIOPROCESS AND BIOSYSTEMS ENGINEERING
影响因子:
3.8
作者:
[Dinh, Thai Nho, Nagahisa, Keisuke, Shimizu, Hiroshi]
通讯作者:
Shimizu, Hiroshi
酵母を用いたL-乳酸生産における遺伝子破壊の影響の網羅的解析
综合分析基因破坏对酵母生产 L-乳酸的影响
DOI:
--
发表时间:
2009
期刊:
影响因子:
--
作者:
[竹國正矩, 平沢敬, 吉川勝徳, 大久保亜紀, 古澤力, 清水浩, 小野直亮, 竹國正矩]
通讯作者:
竹國正矩
DOI:
10.1007/s00253-009-2209-z
发表时间:
2009-09
期刊:
Applied Microbiology and Biotechnology
影响因子:
5
作者:
[T. Hirasawa;A. Ookubo;Katsunori Yoshikawa;K. Nagahisa;C. Furusawa;H. Sawai;H. Shimizu]
通讯作者:
T. Hirasawa;A. Ookubo;Katsunori Yoshikawa;K. Nagahisa;C. Furusawa;H. Sawai;H. Shimizu
DOI:
10.1263/jbb.106.507
发表时间:
2008-11
期刊:
Journal of bioscience and bioengineering
影响因子:
2.8
作者:
[Katsunori Yoshikawa;C. Furusawa;T. Hirasawa;H. Shimizu]
通讯作者:
Katsunori Yoshikawa;C. Furusawa;T. Hirasawa;H. Shimizu
共 21 条
Analysis of adaptive evolution using an automated culture system of E. coli
-
批准号:23680030
-
项目类别:Grant-in-Aid for Young Scientists (A)
-
资助金额:$17.31万
-
财政年份:2011
-
负责人:FURUSAWA Chikara
-
依托单位:
Analysis of differentiation/dedifferentiation dynamics of undifferentiated cells using mathematical modeling
-
批准号:23650152
-
项目类别:Grant-in-Aid for Challenging Exploratory Research
-
资助金额:$1.58万
-
财政年份:2011
-
负责人:FURUSAWA Chikara
-
依托单位:
海外基金