Establishment and application of the strategies for the discovery of biomarker proteins and peptides including species bound to albumin in serum/plasma
Establishment and application of the strategies for the discovery of biomarker proteins and peptides including species bound to albumin in serum/plasma
批准号:
22390117
负责人:
KODERA Yoshio
金额:
$11.4万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2010
资助国家:
日本
项目状态:
已结题
起止时间:
2010 至 2012
中文摘要
我们建立了一种差示溶解(DS)法来提取小分子蛋白质/肽,该方法含有许多与血清中白蛋白等载体蛋白结合的多肽,具有良好的重复性和收率。使用DS方法,我们对1μL血清样本中的1,500多个多肽进行了高质量的比较分析。此外,我们对DS方法进行了优化,以选择性地浓缩小于6 kDa的多肽。将改进的DS法与LC-MS联用,发现了两个肾癌候选多肽。
英文摘要
We developed a differential solubilization (DS) method to extract low-molecular-weight proteins/peptides containing many peptides bound to carrier proteins such as albumin in serum with good reproducibility and yield. Using the DS method we performed high-quality comparative analyses of more than 1500 peptides from 1μL of serum samples. Furthermore, we optimized the DS method to selectively enrich peptides less than 6 kDa. The modified DS method was combined with LC-MS and Two candidate peptides of renal cell carcinoma were discovered.
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Medaka fish, Oryzias latipes, as a model for human obesity-related glomerulopathy.
Medaka Fish,Oryzias latipes,作为与肥胖相关的肾小球病的模型。
DOI:
10.1016/j.bbrc.2013.01.053
发表时间:
2013-02-22
期刊:
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
影响因子:
3.1
作者:
[Ichimura, Koichiro, Kawashima, Yusuke, Nakamura, Tomomi, Powell, Rebecca, Hidoh, Yuya, Terai, Shuji, Sakaida, Isao, Kodera, Yoshio, Tsuji, Takashi, Ma, Jian-Xing, Sakai, Tatsuo, Matsumoto, Hiroyuki, Obara, Tomoko]
通讯作者:
Obara, Tomoko
血中診断マーカーペプチド獲得を目指した ペプチドーム解析法の包括的な開発
全面开发肽组分析方法以获得血液诊断标记肽
DOI:
--
发表时间:
2012
期刊:
影响因子:
--
作者:
[Sogawa K, Kodera Y, Satoh M, Kawashima Y, Umemura H, Maruyama K, Takizawa H, Yokosuka O, Nomura F, 小寺義男, 小寺義男]
通讯作者:
小寺義男
DOI:
10.1155/2012/623190
发表时间:
2012
期刊:
International journal of proteomics
影响因子:
--
作者:
[Kimura A, Sogawa K, Satoh M, Kodera Y, Yokosuka O, Tomonaga T, Nomura F]
通讯作者:
Nomura F
A new possible lung cancer marker: VGF detection from the conditioned medium of pulmonary large cell neuroendocrine carcinoma-derived cells using secretome analysis
一种新的可能的肺癌标志物:使用分泌组分析从肺大细胞神经内分泌癌衍生细胞的条件培养基中检测 VGF
DOI:
--
发表时间:
2009
期刊:
Int J Biol Markers
影响因子:
--
作者:
[Matsumoto T, Kawashima Y, Nagashio R, Kageyama T, Kodera Y, Jiang SX, Okayasu I, Kameya T, Sato Y]
通讯作者:
Sato Y
Proteomic study of sera from patients with bladder cancer: usefulness of S100A8 and S100A9 proteins.
DOI:
--
发表时间:
2010-07
期刊:
Cancer genomics & proteomics
影响因子:
2.5
作者:
[S. Minami;Yuichi Sato;Toshihide Matsumoto;Taihei Kageyama;Y. Kawashima;K. Yoshio;Junnichi Ishii;Kazumasa Matsumoto;R. Nagashio;I. Okayasu]
通讯作者:
S. Minami;Yuichi Sato;Toshihide Matsumoto;Taihei Kageyama;Y. Kawashima;K. Yoshio;Junnichi Ishii;Kazumasa Matsumoto;R. Nagashio;I. Okayasu
共 45 条
Establishment of a strategy for the detection of disease-related modification of proteins in serum
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批准号:23659305
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项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.41万
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财政年份:2011
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负责人:KODERA Yoshio
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依托单位:
Development of novel serum peptidomic strategy and its application in the discovery of tumor marker peptides
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批准号:18390175
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.89万
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财政年份:2006
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负责人:KODERA Yoshio
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依托单位:
Tags for oxidized proteins (TOP) useful for assessing the effect of reactive oxygen species on disease proteomics
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批准号:15310141
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$5.06万
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财政年份:2003
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负责人:KODERA Yoshio
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依托单位:
Structure-activity relationship of human immunodeficiency virus nucleocapsid protein
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批准号:11680665
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.37万
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财政年份:1999
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负责人:KODERA Yoshio
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依托单位: