The project develops new techniques for the interactive navigtion, visualization, and analysis of heterogeneous biological networks
The project develops new techniques for the interactive navigtion, visualization, and analysis of heterogeneous biological networks
批准号:
81651418
负责人:
Professor Dr. Michael Kaufmann, Ph.D.
金额:
$0.0万
依托单位国家:
德国
项目类别:
Priority Programmes
财政年份:
2008
资助国家:
德国
项目状态:
已结题
起止时间:
2007-12-31 至 2014-12-31
中文摘要
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英文摘要
The objective of this project is the development of novel visual analytics techniques for biological data in the context of networks. The core components of the visual analytics framework are automated methods for data integration, efficient data analysis methods, and sophisticated graph drawing techniques. Data integration will be strongly supported and simplified by using an extended BioPAX model. The novel visual analytics techniques will enable users to map high-throughput data (transcriptomics, proteomics, metabolomics) onto the unified network data of several public databases and to carry out challenging analyses in an efficient and effective way. Customized data visual analytics tools for various clinical applications (e.g., personalized cancer therapy) will enable the efficient analysis of these high-throughput data sets in medical settings. In contrast to the first funding period, where the focus was on laying the foundations of a visual analytics framework for biological networks, the second period will concentrate on bringing this framework closer to the application. Together with selected collaboration partners we will literally bring visual analytics to the physician’s desk.
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DOI:
10.1093/bioinformatics/btv770
发表时间:
2016-05-15
期刊:
BIOINFORMATICS
影响因子:
5.8
作者:
[Stoeckel, Daniel, Kehl, Tim, Lenhof, Hans-Peter]
通讯作者:
Lenhof, Hans-Peter
Rebuilding KEGG Maps: Algorithms and Benefits
重建 KEGG 地图:算法和优点
DOI:
10.1109/pacificvis.2014.45
发表时间:
2014
期刊:
2014 IEEE Pacific Visualization Symposium
影响因子:
--
作者:
[Gerasch A, Kaufmann, Kohlbacher]
通讯作者:
Kohlbacher
DOI:
10.1074/mcp.o113.036681
发表时间:
2014-10
期刊:
Molecular & cellular proteomics : MCP
影响因子:
--
作者:
[Griss J, Jones AR, Sachsenberg T, Walzer M, Gatto L, Hartler J, Thallinger GG, Salek RM, Steinbeck C, Neuhauser N, Cox J, Neumann S, Fan J, Reisinger F, Xu QW, Del Toro N, Pérez-Riverol Y, Ghali F, Bandeira N, Xenarios I, Kohlbacher O, Vizcaíno JA, Hermjakob H]
通讯作者:
Hermjakob H
DOI:
10.1074/mcp.o113.028506
发表时间:
2013-08
期刊:
Molecular & cellular proteomics : MCP
影响因子:
--
作者:
[Walzer M, Qi D, Mayer G, Uszkoreit J, Eisenacher M, Sachsenberg T, Gonzalez-Galarza FF, Fan J, Bessant C, Deutsch EW, Reisinger F, Vizcaíno JA, Medina-Aunon JA, Albar JP, Kohlbacher O, Jones AR]
通讯作者:
Jones AR
New Models and Methods for the Effective Orthogonal Layout of Graphs
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批准号:249458560
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项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2014
-
负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
Graphenzeichnen für Geschäftsprozesse
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批准号:157294259
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项目类别:Research Grants
-
资助金额:$0.0万
-
财政年份:2009
-
负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
Structure-based Algorithm Engineering for SAT-Solving
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批准号:47775802
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项目类别:Priority Programmes
-
资助金额:$0.0万
-
财政年份:2007
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负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
Evolutionstheorien für natürliche und technische Netzwerke
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批准号:5422241
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项目类别:Priority Programmes
-
资助金额:$0.0万
-
财政年份:2004
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负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
WWW - Visualisierung und Analyse
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批准号:5319912
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项目类别:Priority Programmes
-
资助金额:$0.0万
-
财政年份:2001
-
负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
Applied graph drawing
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批准号:5237426
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项目类别:Research Grants
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资助金额:$0.0万
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财政年份:1999
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负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
Beyond-planarity: A generalization of the planarity concept in graph drawing
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批准号:364468267
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项目类别:Research Grants
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资助金额:$0.0万
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财政年份:--
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负责人:Professor Dr. Michael Kaufmann, Ph.D.
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依托单位:
海外基金