Transcriptional Regulation in Yeast Genomic Chromatin
酵母基因组染色质的转录调控
基本信息
- 批准号:09044235
- 负责人:
- 金额:$ 1.54万
- 依托单位:
- 依托单位国家:日本
- 项目类别:Grant-in-Aid for Scientific Research (C).
- 财政年份:1997
- 资助国家:日本
- 起止时间:1997 至 1999
- 项目状态:已结题
- 来源:
- 关键词:
项目摘要
The purpose of this project is to elucidate mechanisms of transcriptional regulation through chromatin alteration in early meiotic genes in yeast Saccharomyces cerevisiae. The process of entering meiosis in S. cerevisiae is regulated by both environmental signals and a cascade of regulatory genes. The IME1 and IME2 (Inducer of meiosis) gene products play a pivotal role in the decision to initiate meiosis. Rme1p represses IME1 in haploid cells, which are unable to enter meiosis, whereas Ume6p complexed with histone deacetylase Rpd3p represses IME2 in vegetative cells. In this study, we examined mechanisms of repression by Rme1p and Ume6p-Rpd3p in vivo. We demonstrated that Rme1p acts at a distance to prevent activators from binding to their target sites to exert repression in vivo, and proposed that Rme1p may establish a localized repressive chromatin domain. On the other hand, it was shown that activators is present their target sites in promoters repressed by Ume6p-Rpd3p. These results can not be explained by a model proposed widely that histone acetylation-deacetylation modulates the nucleosome structure to regulate trans-acting factor binding. Furthermore, we found that an artificial recruitment of TBP (TATA box binding protein) bypasses repression by Ume6p-Rpd3p, suggesting that histone deacetylarion inhibits TBP binding and/or recruitment of RNA polymerase II holoenzyme. In summery, we proposed novel mechanisms for repression by Rme1p and Ume6p-Rpd3p in relation to chromatin. These findings may be relevant for all eukaryotic cells, since transcription factors studied here are evolutionarily conserved.
本项目旨在阐明酵母减数分裂早期基因染色质改变的转录调控机制。酿酒酵母进入减数分裂的过程受环境信号和一系列调控基因的调控。IME1和IME2(减数分裂诱导剂)基因产物在决定是否启动减数分裂中起关键作用。在无法进入减数分裂的单倍体细胞中,Rme1p抑制IME1,而在营养细胞中,Ume6p与组蛋白去乙酰化酶Rpd3p复合物抑制IME2。在这项研究中,我们研究了Rme1p和Ume6p-Rpd3p在体内的抑制机制。我们证明了Rme1p在体内远距离阻止激活子与其靶位点结合以发挥抑制作用,并提出Rme1p可能建立了一个局部的抑制染色质结构域。另一方面,研究表明激活剂的靶位点存在于Ume6p-Rpd3p抑制的启动子中。这些结果不能用一个广泛提出的模型来解释,即组蛋白乙酰化-去乙酰化调节核小体结构以调节反式作用因子的结合。此外,我们发现TBP (TATA box binding protein)的人工募集绕过了Ume6p-Rpd3p的抑制,这表明组蛋白去乙酰化离子抑制了TBP的结合和/或RNA聚合酶II全酶的募集。总之,我们提出了Rme1p和Ume6p-Rpd3p与染色质相关的抑制机制。这些发现可能与所有真核细胞相关,因为这里研究的转录因子是进化保守的。
项目成果
期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Mitsuhiro Shimizu, Weisih Li, Peter A. Covitz, Masae Hara, Heisaburo Shindo and Aaron P. Mitchell: "Genomic footprinting of the yeast zinc-finger protein Rme1p and its roles in repression of the meiotic activator IME1"Nucleic Acids Res.. 26. 2329-2336 (19
Mitsuhiro Shimizu、Weisih Li、Peter A. Covitz、Masae Hara、Heisaburo Shindo 和 Aaron P. Mitchell:“酵母锌指蛋白 Rme1p 的基因组足迹及其在减数分裂激活剂 IME1 抑制中的作用”核酸研究 26
- DOI:
- 发表时间:
- 期刊:
- 影响因子:0
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- 通讯作者:
Mitsuhiro Shimizu, Masae Hara, Atsushi Murase, Heisaburo Shindo, and Aaron P. Mitchell: "Dissection of the DNA binding domain of yeast Zn-finger protein Rme1p, a repressor of meiotic activator IME1"Nucleic Acids Symp. Ser.. 37. 175-176 (1997)
Mitsuhiro Shimizu、Masae Hara、Atsushi Murase、Heisaburo Shindo 和 Aaron P. Mitchell:“酵母 Zn 指蛋白 Rme1p 的 DNA 结合域的解剖,减数分裂激活剂 IME1 的阻遏物”核酸 Symp。
- DOI:
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- 影响因子:0
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- 通讯作者:
Mitsuhiro Shimizu: "Mechanisms of chromatin alteration in transcriptional regulation"Biophysics. 39,(in Japanese). 376-380 (1999)
Mitsuhiro Shimizu:“转录调控中染色质改变的机制”生物物理学。
- DOI:
- 发表时间:
- 期刊:
- 影响因子:0
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Mitsuhiro Shimizu: "Genomic footprinting of the yeast zinc finger protein Rmelp and its roles in repression of the meiotic activator IMEI." Nucleic Acids Res.26. 2319-2336 (1998)
Mitsuhiro Shimizu:“酵母锌指蛋白 Rmelp 的基因组足迹及其在抑制减数分裂激活剂 IMEI 中的作用。”
- DOI:
- 发表时间:
- 期刊:
- 影响因子:0
- 作者:
- 通讯作者:
Mitsuhiro Shimizu: "Dissection of the DNA binding domain of yeast Zn-finger protein Rmelp,a repressor of meiotic activator IME1." Nucleic Acids Symp.Ser.37. 175-176
Mitsuhiro Shimizu:“酵母 Zn 指蛋白 Rmelp 的 DNA 结合域的剖析,Rmelp 是减数分裂激活剂 IME1 的抑制因子。”
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- 影响因子:0
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SHIMIZU Mitsuhiro其他文献
SHIMIZU Mitsuhiro的其他文献
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{{ truncateString('SHIMIZU Mitsuhiro', 18)}}的其他基金
Functional analysis of cis-and trans-acting factors to govern chromatin dynamisms in transcriptional regulation
转录调控中控制染色质动态的顺式和反式作用因子的功能分析
- 批准号:
21570185 - 财政年份:2009
- 资助金额:
$ 1.54万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Molecular organization and dynamics in chromatin domains for gene expression control
用于基因表达控制的染色质域中的分子组织和动力学
- 批准号:
19570169 - 财政年份:2007
- 资助金额:
$ 1.54万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Mechanisms of transcriptional regulation through chromatin in the commitment of the yeast cells
酵母细胞定型中通过染色质进行转录调控的机制
- 批准号:
17570147 - 财政年份:2005
- 资助金额:
$ 1.54万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Mechanisms of chromatin organization in genome dictated by DNA structural properties.
基因组中染色质组织机制由 DNA 结构特性决定。
- 批准号:
14572079 - 财政年份:2002
- 资助金额:
$ 1.54万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
Mechanisms of the triplet repeat expansion in eukaryotic chromatin.
真核染色质三联体重复扩增的机制。
- 批准号:
11672193 - 财政年份:1999
- 资助金额:
$ 1.54万 - 项目类别:
Grant-in-Aid for Scientific Research (C)
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