Targeting cell senescence in a novel model of spontaneous disc degeneration
Targeting cell senescence in a novel model of spontaneous disc degeneration
批准号:
10277819
负责人:
Makarand V Risbud
金额:
$59.13万
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
未结题
起止时间:
2021-09-01 至 2026-05-31
关键词:
AcuteAddressAffectAmericanAnimal ModelBackBiologicalCandidate Disease GeneCanis familiarisCell AgingCell SurvivalCell physiologyCellsChIP-seqChronicDasatinibDataDiseaseEtiologyExcisionExhibitsGene ExpressionGenesGeneticGenetic VariationGenotypeGerbilsGoalsHealthHealth StatusHumanInbred Strains MiceInflammatoryInjuryInterventionIntervertebral disc structureLG/J MouseLifeLinkLow Back PainMeasuresMetabolicMetabolismModelingModificationMolecularMolecular GeneticsMouse StrainsMusMutationNeckNeck PainOpioidOrganOrgan Culture TechniquesPathogenesisPathologyPathway interactionsPharmaceutical PreparationsPhenotypePilot ProjectsPopulationPrevalenceProcessPublishingQuantitative Trait LociQuercetinReportingResolutionRisk FactorsSM/J MouseSNP arraySand RatsStructureTestingTimeTissue PreservationTissuesTraumatic injuryVariantVertebral columnbaseburden of illnessearly onsetexperiencegenetic analysisgenetic manipulationgenome wide association studyhealingin vivoinsightinsurance claimsintervertebral disk degenerationmetabolic profilemetabolomicsmouse genomemouse modelnovelnucleus pulposusopioid abuseopioid mortalitypreventregenerativeregenerative tissuesenescencetherapeutic developmenttraittranscriptometranscriptome sequencingtranscriptomicsyears lived with disability
中文摘要
椎间盘退变是与慢性颈部和腰痛相关的主要危险因素,
影响全世界数百万人的普遍存在的健康状况。有一个不完整的理解
椎间盘退变的发病机制部分是由于缺乏适当的动物模型。当前动物
模型主要使用创伤性损伤来促进与大多数人类椎间盘病例不同的退化
退化虽然,一些动物模型的自发性椎间盘退变的报道,一些局限性,
防止其广泛使用。因此,非常需要更具代表性的小动物模型
人类椎间盘病理学以前的研究调查了近交系小鼠,包括SM/J和LG/J
因为它们的再生能力。与LG/J相比,SM/J是一个“超级治疗者”菌株,被发现是一个“差的治疗者”。
然而,没有研究调查这些品系小鼠的椎间盘健康状况。我们第一次展示
SM/J小鼠表现出自发性椎间盘退变的时间,其捕获了人类椎间盘的重要特征
病理基于我们新的试点数据,我们假设这种退行性表型具有很强的遗传易感性。
基础和细胞表型,代谢和衰老的早期变化驱动。我们将调查
细胞和遗传机制的基础上的椎间盘退变的SM/J小鼠在三个目的。在目标1中,
检验SM/J小鼠椎间盘退变的特征在于细胞存活受损、改变
细胞表型、代谢和衰老。我们将对NP-RNA的NP组织进行RNA-Seq和ChIP-Seq分析。
SM/J和LG/J小鼠。我们还将进行代谢组学,以确定细胞的代谢状态。这些研究
将为转录组和代谢的时间变化提供公正的见解,
SM/J小鼠椎间盘退变发病机制的核心途径和机制。在目标2中,
测试从椎间盘中去除衰老细胞减缓椎间盘疾病进展的假设。
SM/J小鼠的椎间盘退变。初步研究表明,衰老细胞的积累,
SM/J盘。我们将在早期和建立期对离体器官培养的椎间盘和SM/J小鼠进行体内治疗,
用特征明确的衰老清除药物对椎间盘退变分期进行分析,
和基因变化。最后,在目标3中,我们将描述有助于细胞增殖的遗传机制。
衰老和椎间盘退变。我们将进行全基因组关联研究(GWAS)
使用LG/J x SM/J高级互交系(AIL)来发现小鼠基因组中有助于
椎间盘退变的差异。为此,将在143,000 GIGAmuga芯片上对AIL小鼠进行基因分型
将来自几只小鼠的单核苷酸多态性(SNP)和圆盘用于RNA-Seq分析。
总之,这些数据将被用来确定高分辨率的数量性状基因座(QTL)的光盘性状~5基因
每个支撑间隔。将鉴定负责这些QTL的基因。这一目标将产生候选人
可能导致LG/J和SM/J品系之间衰老和椎间盘退变变异的基因。
英文摘要
Intervertebral disc degeneration is the major risk factor associated with chronic neck and low back pain,
ubiquitous health conditions that affects millions of people world-wide. There is an incomplete understanding
of the pathogenesis of disc degeneration partially due to lack of an appropriate animal model. Current animal
models primarily use traumatic insults to promote degeneration differing from most human cases of disc
degeneration. While, a few animal models of spontaneous disc degeneration are reported, several limitations
prevent their wide-spread use. Thus, there is a great need for small animal models that are more representative
of human disc pathology. Previous studies have investigated inbred strains of mice including SM/J and LG/J
for their regenerative ability. In contrast to LG/J, a “super healer” strain, SM/J was found to be a “poor healer”.
However, there no studies have investigated the disc health status in these strains of mice. We show for the first
time that SM/J mice exhibit spontaneous disc degeneration that captures important features of human disc
pathology. Based on our novel pilot data, we hypothesize that this degenerative phenotype has a strong genetic
basis and driven by early changes in cell phenotype, metabolism and senescence. We will investigate the
cellular and genetic mechanisms that underlie disc degeneration in SM/J mice in three Aims. In Aim 1 we will
test the hypothesis that disc degeneration in SM/J mice is characterized by compromised cell survival, altered
cell phenotype, metabolism and senescence. We will perform RNA-Seq and ChIP-Seq analysis of NP tissue of
SM/J and LG/J mice. We will also perform metabolomics to determine metabolic status of cells. These studies
will provide unbiased insights into temporal alterations in transcriptome and metabolism to delineate
pathways and mechanisms central to the pathogenesis of disc degeneration in SM/J mice. In Aim 2 we will
test the hypothesis that removal of senescent cells from the intervertebral disc slows down the progression of
disc degeneration in SM/J mice. Pilot studies have shown that there is an accumulation of senescent cells in
SM/J discs. We will treat ex vivo organ cultured discs and SM/J mice in vivo during early and established
stages of disc degeneration with well-characterized senolytic drugs and analyze metabolic, histopathological
and genetic changes. Lastly in Aim 3 we will delineate the genetic mechanisms that contribute to cell
senescence and disc degeneration in SM/J mice. We will perform a genome-wide association study (GWAS)
using LG/J x SM/J Advanced Intercross Lines (AILs) to discover regions of the mouse genome contributing to
differences in disc degeneration. For this purpose, AIL mice will be genotyped at 143,000 GIGAmuga chip
single nucleotide polymorphisms (SNPs) and discs from several mice will be used for RNA-Seq analysis.
Together, these data will be used to identify high-resolution quantitative trait loci (QTL) for disc traits ~5 genes
per support interval. The genes responsible for these QTL will be identified. This aim will generate candidate
genes likely contributing to variation in the senescence and disc degeneration between LG/J and SM/J strains.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
2021 ORS/PSRS 6th International Spine Research Symposium
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批准号:10540609
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项目类别:
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资助金额:$1.5万
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财政年份:2022
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负责人:Makarand V Risbud
-
依托单位:
Targeting cell senescence in a novel model of spontaneous disc degeneration
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批准号:10839574
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项目类别:
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资助金额:$7.97万
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财政年份:2021
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负责人:Makarand V Risbud
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依托单位:
Targeting cell senescence in a novel model of spontaneous disc degeneration
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批准号:10471403
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项目类别:
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资助金额:$57.15万
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财政年份:2021
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负责人:Makarand V Risbud
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依托单位:
Epigenetic Mechanisms of Spontaneous Disc Degeneration in SM/J Mice
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批准号:10757531
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项目类别:
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资助金额:$1.99万
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财政年份:2021
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负责人:Makarand V Risbud
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依托单位:
Targeting cell senescence in a novel model of spontaneous disc degeneration
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批准号:10634637
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项目类别:
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资助金额:$58.01万
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财政年份:2021
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负责人:Makarand V Risbud
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依托单位:
Pathogenesis of Inflammation-driven Intervertebral Disc Herniation: The Role of Syndecan 4
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批准号:9754682
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项目类别:
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资助金额:$46.25万
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财政年份:2019
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负责人:Makarand V Risbud
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依托单位:
Pathogenesis of Inflammation-driven Intervertebral Disc Herniation: The Role of Syndecan 4
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批准号:10553254
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项目类别:
-
资助金额:$45.09万
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财政年份:2019
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负责人:Makarand V Risbud
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依托单位:
Pathogenesis of Inflammation-driven Intervertebral Disc Herniation: The Role of Syndecan 4
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批准号:9895623
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项目类别:
-
资助金额:$46.25万
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财政年份:2019
-
负责人:Makarand V Risbud
-
依托单位:
Pathogenesis of Inflammation-driven Intervertebral Disc Herniation: The Role of Syndecan 4
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批准号:10091307
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项目类别:
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资助金额:$45.8万
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财政年份:2019
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负责人:Makarand V Risbud
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依托单位:
New Horizons in Intervertebral Disc Research
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批准号:9398697
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项目类别:
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资助金额:$1.5万
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财政年份:2017
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:7663130
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项目类别:
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资助金额:$33.41万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:10588127
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项目类别:
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资助金额:$52.25万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:7812188
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项目类别:
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资助金额:$33.65万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:8064681
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项目类别:
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资助金额:$32.3万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:8259192
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项目类别:
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资助金额:$32.3万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:8501946
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项目类别:
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资助金额:$36.41万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:8632992
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项目类别:
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资助金额:$36.04万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:9755086
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项目类别:
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资助金额:$51.63万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:9914217
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项目类别:
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资助金额:$52.25万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
Role of HIF-1 in Intervertebral Disc Function
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批准号:10359142
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项目类别:
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资助金额:$51.72万
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财政年份:2008
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负责人:Makarand V Risbud
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依托单位:
海外基金