Cell decision underlying B-cell immune responses
Cell decision underlying B-cell immune responses
批准号:
10330546
负责人:
Alexander Hoffmann
金额:
$41.9万
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
未结题
起止时间:
2018-02-01 至 2025-01-31
关键词:
AddressAdjuvantAffinityAntibodiesAntibody AffinityAntibody DiversityAntibody ResponseAntigensB Cell ProliferationB cell differentiationB-LymphocytesCell CycleCell Differentiation processCell SizeCell SurvivalCellsCessation of lifeChromatinComputer ModelsComputer SimulationDataDecision MakingDown-RegulationEffectivenessEquilibriumEventFailureFamily memberFeedbackFundingGenerationsGenomicsGoalsGrowthHeterogeneityHumoral ImmunitiesImmuneImmune responseImmunoglobulin Somatic HypermutationIndividualInterferometryLiteratureLymphomaMediatingMemory B-LymphocyteMicroscopyModelingMolecularMouse StrainsMusPhasePhysiologicalPlasmaPlasma CellsPopulationPopulation DynamicsProcessProliferatingRaceReactionReporterRepressionSignal TransductionSoftware ToolsStimulusStructureStructure of germinal center of lymph nodeSystemSystems BiologyTechnologyTestingTreesVaccinationVaccine AntigenVenusc-myc Genesdimergenetic pedigreeimprovedin vivolive cell microscopymulti-scale modelingmutantnovelplasma cell differentiationprogramsresponsesimulationtool
中文摘要
项目总结/文摘
英文摘要
Project Summary/Abstract
A hallmark of the humoral immune response is a two phased antibody response, the first being rapid and
providing for low affinity antibodies, and the second occurring with a week delay but providing high affinity
antibodies. An appropriate balance of both phases of the response is critical for an effective immune
response.
The two phased humoral immune response is governed by B-cell population dynamics that represent the
composite of the decisions made by individual cells whether to enter a growth phase and the cell cycle that
results in division, whether to survive or die, and whether to differentiate into antibody secreting plasma cells
and/or memory B-cells. At any given timepoint there is a great variety of B-cell fates, and prior studies
assumed that this is due to stochastic fate decisions by individual cells at each generation. Instead, our
recently established long-term microscopy workflow revealed that cells make highly deterministic fate
decisions, and that the cell-to-cell variability within the population is largely due to heterogeneity in the founder
cells. This renders humoral immunity substantially more predictable, so long as we have a mechanistic
understanding of how molecular networks control B-cell decision making in proliferation and differentiation.
The overarching goal of the proposed project is to develop quantitative understanding and multi-scale model of
how the multi-dimeric NFκB system controls B-cell decision making to effect cell survival, proliferation, and
differentiation.
The overarching hypothesis of the proposed studies is that the coordinated dynamics of NFκB family members
RelA and cRel control the phasing of B-cell proliferation and differentiation and thus the affinity, abundance
and diversity of antibodies and hence efficacy of the humoral immune response.
We will address this hypothesis with an iterative systems biology approach structured into following three
Specific Aims:
1. Delineate how NFκB system dynamics control the lineages of proliferating B-cells
2. Delineate how NFκB system dynamics control plasma B-cell differentiation
3. NFκB system control of humoral immunity in vivo: phasing low and high affinity antibody responses
Each Aim involves novel multiscale mathematical modeling and quantitative experimentation, including
unprecedented long term microscopy, novel fluorescent reporter mouse strains, and single cell genomic
technologies.
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A Regulatory Circuit Controlling the Dynamics of NFκB cRel Transitions B Cells from Proliferation to Plasma Cell Differentiation.
控制 NFκB cRel 动力学的调节电路将 B 细胞从增殖转变为浆细胞分化。
DOI:
10.1016/j.immuni.2019.02.004
发表时间:
2019
期刊:
Immunity
影响因子:
32.4
作者:
[Roy,Koushik, Mitchell,Simon, Liu,Yi, Ohta,Sho, Lin,Yu-Sheng, Metzig,MarieOliver, Nutt,StephenL, Hoffmann,Alexander]
通讯作者:
Hoffmann,Alexander
Substrate complex competition is a regulatory motif that allows NFκB RelA to license but not amplify NFκB RelB.
底物复合物竞争是一种监管主题,允许 NFκB RelA 许可但不能放大 NFκB RelB。
DOI:
10.1073/pnas.1816000116
发表时间:
2019
期刊:
Proceedings of the National Academy of Sciences of the United States of America
影响因子:
11.1
作者:
[Mitchell,Simon, Hoffmann,Alexander]
通讯作者:
Hoffmann,Alexander
DOI:
10.3390/biomedicines10050974
发表时间:
2022-04-22
期刊:
Biomedicines
影响因子:
4.7
作者:
[]
通讯作者:
DOI:
10.3389/fimmu.2022.898078
发表时间:
2022
期刊:
FRONTIERS IN IMMUNOLOGY
影响因子:
7.3
作者:
[Vaidehi Narayanan, Haripriya, Hoffmann, Alexander]
通讯作者:
Hoffmann, Alexander
Studying NF-κB signaling with mathematical models.
用数学模型研究 NF-κB 信号传导。
DOI:
10.1007/978-1-4939-2422-6_38
发表时间:
2015
期刊:
Methods in molecular biology (Clifton, N.J.)
影响因子:
--
作者:
[Mitchell,Simon, Tsui,Rachel, Hoffmann,Alexander]
通讯作者:
Hoffmann,Alexander
共 6 条
Characterizing functional states of macrophages via their stimulus-responses
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批准号:10737449
-
项目类别:
-
资助金额:$71.0万
-
财政年份:2023
-
负责人:Alexander Hoffmann
-
依托单位:
Bruins in Genomics: Dental, Oral & Craniofacial Research Training Program (BIG DOC)
-
批准号:10540402
-
项目类别:
-
资助金额:$25.7万
-
财政年份:2021
-
负责人:Alexander Hoffmann
-
依托单位:
Bruins in Genomics: Dental, Oral & Craniofacial Research Training Program (BIG DOC)
-
批准号:10328979
-
项目类别:
-
资助金额:$31.72万
-
财政年份:2021
-
负责人:Alexander Hoffmann
-
依托单位:
The NFkB System in Dendritic Cells
-
批准号:9891942
-
项目类别:
-
资助金额:$43.43万
-
财政年份:2018
-
负责人:Alexander Hoffmann
-
依托单位:
Cell decision underlying B-cell immune responses
-
批准号:10094180
-
项目类别:
-
资助金额:$42.7万
-
财政年份:2018
-
负责人:Alexander Hoffmann
-
依托单位:
The NFkB System in Dendritic Cells
-
批准号:10375381
-
项目类别:
-
资助金额:$41.52万
-
财政年份:2018
-
负责人:Alexander Hoffmann
-
依托单位:
Core D: Computational
-
批准号:10000880
-
项目类别:
-
资助金额:$11.91万
-
财政年份:2017
-
负责人:Alexander Hoffmann
-
依托单位:
Coordinated dynamic regulation and function of IRF transcription factors
-
批准号:10155390
-
项目类别:
-
资助金额:$39.0万
-
财政年份:2017
-
负责人:Alexander Hoffmann
-
依托单位:
Core D: Computational
-
批准号:10225362
-
项目类别:
-
资助金额:$12.47万
-
财政年份:2017
-
负责人:Alexander Hoffmann
-
依托单位:
NFkB Signaling in Macrophages
-
批准号:10054972
-
项目类别:
-
资助金额:$38.5万
-
财政年份:2016
-
负责人:Alexander Hoffmann
-
依托单位:
Roles of RelB in tuning inflammatory and innate immune responses
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批准号:9228009
-
项目类别:
-
资助金额:$23.1万
-
财政年份:2016
-
负责人:Alexander Hoffmann
-
依托单位:
Understanding dynamical coding by NFkB
-
批准号:9223713
-
项目类别:
-
资助金额:$61.07万
-
财政年份:2016
-
负责人:Alexander Hoffmann
-
依托单位:
NGS Data Analysis Skills for the Biosciences Pipeline
-
批准号:9044430
-
项目类别:
-
资助金额:$16.0万
-
财政年份:2015
-
负责人:Alexander Hoffmann
-
依托单位:
Epigenomic control of RNA splicing
-
批准号:8815662
-
项目类别:
-
资助金额:$30.8万
-
财政年份:2014
-
负责人:Alexander Hoffmann
-
依托单位:
Epigenomic control of RNA splicing
-
批准号:8921202
-
项目类别:
-
资助金额:$30.8万
-
财政年份:2014
-
负责人:Alexander Hoffmann
-
依托单位:
SEED PROJECT
-
批准号:8151848
-
项目类别:
-
资助金额:$15.45万
-
财政年份:2010
-
负责人:Alexander Hoffmann
-
依托单位:
Center for Systems Biology of Cellular Stress Responses
-
批准号:8145605
-
项目类别:
-
资助金额:$297.25万
-
财政年份:2010
-
负责人:Alexander Hoffmann
-
依托单位:
CORE E: EDUCATION
-
批准号:8151886
-
项目类别:
-
资助金额:$3.09万
-
财政年份:2010
-
负责人:Alexander Hoffmann
-
依托单位:
Center for Systems Biology of Cellular Stress Responses
-
批准号:8332812
-
项目类别:
-
资助金额:$295.64万
-
财政年份:2010
-
负责人:Alexander Hoffmann
-
依托单位:
Center for Systems Biology of Cellular Stress Responses
-
批准号:8608685
-
项目类别:
-
资助金额:$5.44万
-
财政年份:2010
-
负责人:Alexander Hoffmann
-
依托单位:
海外基金