Research Core
Research Core
批准号:
10348699
负责人:
TRUDY F. MACKAY
金额:
$40.86万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
未结题
起止时间:
2021-02-10 至 2026-01-31
关键词:
AdoptionAnimal ModelAwardBioinformaticsBiologyCenters of Research ExcellenceChromiumComputer softwareCore FacilityCustomDNA ResequencingDataDevelopmentDoctor of PhilosophyEducational workshopEpigenetic ProcessExperimental DesignsFacultyFee-for-Service PlansGenerationsGeneticGenomeGenomicsHigh Performance ComputingHumanHuman GeneticsHuman ResourcesInfrastructureInstitutionLaboratoriesMemoryMethodsModernizationMolecular BiologyNucleotidesPerformancePilot ProjectsPopulationPostdoctoral FellowProgram Research Project GrantsRNA analysisResearchResearch PersonnelResearch Project GrantsResourcesRunningScientistServicesSisterSouth CarolinaStatistical Data InterpretationSupervisionTechnologyTissue-Specific Gene ExpressionTrainingUniversitiesVariantWorkloadbioinformatics infrastructurebioinformatics resourcecluster computingcomputer infrastructurecomputing resourcesgenome analysisgenome sciencesgenome-widegenomic datagraduate studenthigh throughput analysisinnovationinstrumentationnanoporenext generation sequencingpathogenprogramssequencing platformsingle cell analysissingle moleculestatisticsstudent trainingsuccesstranscriptome sequencing
中文摘要
总结
生成、存储和分析高通量基因组数据的能力对于现代基因组学的许多方面是至关重要的。
生物学,尤其是人类遗传学。克莱姆森大学基因组学和生物信息学机构
(CUGBF)提供小到中等规模的基因组分析和定制的生物信息学服务。的
克莱姆森大学人类遗传学基因组科学实验室中心(CUCHG-GSL)支持-
容纳高通量、大规模基因组分析,包括第三代单分子长读
测序和单细胞分析,以及基因组数据的定制生物信息学和统计分析。
COBRE人类遗传学将扩大克莱姆森大学基因组学和生物信息学的范围
和南卡罗来纳州通过结合和扩大基因组学,生物信息学和计算
CUGBF和CUCHG-GSL的基础设施和人员在一个加强的单一保护伞下
CUGBF。扩展后的CUGBF将涵盖下一代测序平台,
定制生物信息学和统计分析,并就实验设计和基因组学提供建议,
生物信息学研讨会和讲习班。因此,加强后的CUGBF将提供基础设施、项目
指导和监督,以及培训,使COBRE能够参与人类遗传学研究和试点项目
领导人及其实验室团队充分部署现有和新兴的基因组和计算
技术在他们的研究计划。这些服务也将提供给所有克莱姆森大学的教师
以及他们的研究小组和南卡罗来纳州姐妹机构的教师。此外,增强
CUGBF将每月举办基因组学和生物信息学研讨会和实践讲习班,以培训学生,
博士后研究员和教师在获得和分析基因组学数据方面自给自足。的
因此,增强的CUGBF满足了现代基因组学广泛采用的三个关键需求,
生物信息学研究在机构发展奖状态:(1)基因组学的本地可用性,
计算基础设施;(2)为研究人员提供分子生物学和生物信息学服务
这种大规模的分析;和(3)培训研究人员成为自给自足的获取和分析
基因组学数据。
英文摘要
SUMMARY
The ability to generate, store and analyze high throughput genomic data is critical for many aspects of modern
biology, and especially for human genetics. The Clemson University Genomics and Bioinformatics Facility
(CUGBF) provides small to moderate scale genome analysis and customized bioinformatics services. The
Clemson University Center for Human Genetics Genome Sciences Laboratories (CUCHG-GSL) supports in-
house high throughput, large scale genome analysis, including third generation single molecule long-read
sequencing and single cell analyses, as well as custom bioinformatic and statistical analyses of genomic data.
The COBRE in Human Genetics will expand the scope of genomics and bioinformatics at Clemson University
and the State of South Carolina by combining and expanding the genomics, bioinformatics and computational
infrastructure and personnel of the CUGBF and the CUCHG-GSL under the single umbrella of an enhanced
CUGBF. The expanded CUGBF will span the spectrum of next generation sequencing platforms, provide
custom bioinformatics and statistical analyses and advice on experimental design, and genomics and
bioinformatics seminars and workshops. The enhanced CUGBF will thus provide the infrastructure, project
guidance and supervision, and training to empower COBRE in Human Genetics Research and Pilot Project
Leaders and their laboratory groups to fully deploy extant and emerging genomic and computational
technologies in their research programs. These services will also be available for all Clemson University faculty
and their research groups as well as faculty in sister institutions in South Carolina. In addition, the enhanced
CUGBF will host monthly genomics and bioinformatics seminars and hands-on workshops to train students,
postdoctoral fellows and faculty to become self-sufficient in obtaining and analyzing genomics data. The
enhanced CUGBF thus fills three critical needs for the wide scale adoption of modern genomics and
bioinformatics research in an Institutional Development Award state: (1) local availability of genomics and
computational infrastructure; (2) provision of molecular biology and bioinformatics services to investigators new
to such large scale analyses; and (3) training researchers to become self-sufficient in obtaining and analyzing
genomics data.
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会议论文
Admin-Core
-
批准号:10348698
-
项目类别:
-
资助金额:$90.03万
-
财政年份:2021
-
负责人:TRUDY F. MACKAY
-
依托单位:
Admin-Core
-
批准号:10569654
-
项目类别:
-
资助金额:$77.56万
-
财政年份:2021
-
负责人:TRUDY F. MACKAY
-
依托单位:
Admin-Core
-
批准号:10090710
-
项目类别:
-
资助金额:$33.12万
-
财政年份:2021
-
负责人:TRUDY F. MACKAY
-
依托单位:
Research Core
-
批准号:10090711
-
项目类别:
-
资助金额:$41.64万
-
财政年份:2021
-
负责人:TRUDY F. MACKAY
-
依托单位:
Research Core
-
批准号:10569657
-
项目类别:
-
资助金额:$41.57万
-
财政年份:2021
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Diversity in Biomedical and Behavioral Sciences
-
批准号:7897518
-
项目类别:
-
资助金额:$11.24万
-
财政年份:2009
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Diversity in Biomedical and Behavioral Sciences
-
批准号:8051803
-
项目类别:
-
资助金额:$54.76万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Diversity in Biomedical and Behavioral Sciences
-
批准号:7595032
-
项目类别:
-
资助金额:$52.49万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Development in Biomedical and Behavioral Scienc
-
批准号:8451412
-
项目类别:
-
资助金额:$72.61万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Development in Biomedical and Behavioral Scienc
-
批准号:8643250
-
项目类别:
-
资助金额:$75.24万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Diversity in Biomedical and Behavioral Sciences
-
批准号:7798083
-
项目类别:
-
资助金额:$53.1万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Development in Biomedical and Behavioral Scienc
-
批准号:9042385
-
项目类别:
-
资助金额:$28.8万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Diversity in Biomedical and Behavioral Sciences
-
批准号:7363872
-
项目类别:
-
资助金额:$41.01万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Initiative for Maximizing Student Development in Biomedical and Behavioral Scienc
-
批准号:8210486
-
项目类别:
-
资助金额:$55.24万
-
财政年份:2008
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Alcohol Sensitivity in Drosophila
-
批准号:7338347
-
项目类别:
-
资助金额:$32.85万
-
财政年份:2007
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Alcohol Sensitivity in Drosophila
-
批准号:7547081
-
项目类别:
-
资助金额:$32.85万
-
财政年份:2007
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Alcohol Sensitivity in Drosophila
-
批准号:8016019
-
项目类别:
-
资助金额:$31.26万
-
财政年份:2007
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Alcohol Sensitivity in Drosophila
-
批准号:7743583
-
项目类别:
-
资助金额:$32.52万
-
财政年份:2007
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Alcohol Sensitivity in Drosophila
-
批准号:7176976
-
项目类别:
-
资助金额:$32.85万
-
财政年份:2007
-
负责人:TRUDY F. MACKAY
-
依托单位:
Genetics of Aggression in Drosophila
-
批准号:7221929
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项目类别:
-
资助金额:$27.29万
-
财政年份:2006
-
负责人:TRUDY F. MACKAY
-
依托单位:
海外基金