The role of dynamics in defining the limits of normal developmental signaling
The role of dynamics in defining the limits of normal developmental signaling
批准号:
10390229
负责人:
John G. Albeck
金额:
$19.39万
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-08-01 至 2022-06-30
关键词:
AffectAgingAutomationAutophagosomeBiosensorCancer BiologyCell LineCell ProliferationCell modelCellsClustered Regularly Interspaced Short Palindromic RepeatsCollecting CellCommunicationComputer ModelsDataData SetDefectDevelopmentDoseEquipmentEventFaceFailureFos-Related AntigensFundingGene ExpressionGene Expression ProcessGene Expression ProfileGenesGenetic TranscriptionGerm-Line MutationGrantGrowth FactorHeart AbnormalitiesHomeostasisHumanHuman ResourcesHyperactivityImageImaging TechniquesImmersionImpaired cognitionKineticsKnock-inLeadLinkLive BirthMalignant NeoplasmsMeasurementMethodologyMethodsMicroscopyMitochondriaModelingMolecularMorphologyMutationNatureOrganellesPathologicPathologyPathway interactionsPatternPharmacologyPhenotypePhosphotransferasesProbabilityProcessProteinsRegulationReporterResolutionRoleRunningSeriesSignal TransductionSignal Transduction PathwaySurveysSyndromeSystemTechnologyTestingTimeTissuesTranslationsVariantWaterWorkcancer riskcell behaviorcell motilitycognitive developmentdevelopmental diseaseexperimental studyfluorescence microscopegenetic regulatory proteinhuman diseaseimaging systemimprovedindividualized medicineinhibitor/antagonistinstrumentlenslive cell microscopymRNA Differential Displaysmutantparent projectpreferenceresponsesingle cell analysistemporal measurementtransmission process
中文摘要
总结
在这份补充报告中,我们要求资助购买活细胞荧光显微镜,以取代失败的
这将大大提升我们收集细胞信号生物传感器数据的能力,
高空间和时间分辨率。这个补充的父项目集中在使用活细胞
生物传感器实验,以收集激酶活性和基因表达的动力学数据。这些数据集独特地
能够对信号转导途径和基因表达之间的关系进行计算建模。
由于这些长期延时成像实验的时间密集性,我们需要一个专门的
活细胞显微镜系统,可以连续运行多天的实验。我们现有的系统
在生长因子信号传导方面实现了重大的概念和方法上的进步,但面临两个主要问题:
问题:1)由于老化设备的故障而经常停机,2)过时的技术限制了我们的
从活细胞中收集高质量数据的能力。拟议的文书将大大减少
因组件故障而损失的人员时间量。此外,拟议的文书将利用
一个大视场的sCMOS相机,可以在每个实验中从近两倍的细胞中收集数据;
这些额外的数据将通过捕获更多独特的细胞,
行为。最后,新仪器将包括自动化功能,可使用40倍和60倍水浸
用于长时间延时实验的物镜。相对于我们目前的成像系统,
20倍和40倍非浸没镜头,这些镜头将提高空间分辨率和灵敏度,
在这些实验中,我们可以将信号转导和基因表达与关键的形态学变化联系起来,
细胞器,如自噬体和线粒体,我们的工作涉及到调节细胞的功能。
研究动态激酶活性。
英文摘要
Summary
In this supplement, we request funding to purchase a live-cell fluorescence microscope that will replace failing
essential equipment, and which will significantly upgrade our ability to collect cell signaling biosensor data with
high spatial and temporal resolution. The parent project for this supplement is centered on using live-cell
biosensor experiments to collect kinetic data on kinase activity and gene expression. These datasets uniquely
enable computational modeling of the relationship between signal transduction pathways and gene expression.
Because of the time-intensive nature of these long-term time-lapse imaging experiments, we need a dedicated
live-cell microscopy system that can run continuously for multi-day experiments. Our current systems have
enabled significant conceptual and methodological advances in growth factor signaling but face two major
problems: 1) frequent down-time due to failures of aging equipment and 2) outdated technology that limits our
ability to collect high-quality data from live cells. The proposed instrument would dramatically decrease the
amount of personnel time lost to component failures. Furthermore, the proposed instrument will take advantage
of a large field of view sCMOS camera that can collect data from nearly twice as many cells in each experiment;
these additional data will directly improve our computational modeling efforts by capturing more unique cellular
behaviors. Finally, the new instrument will include automation to enable the use of 40X and 60X water immersion
objective lenses for long-term time time-lapse experiments. Relative to our current imaging systems that rely on
20X and 40X non-immersion lenses, these lenses will increase spatial resolution and sensitivity, enabling
experiments in which we can link signal transduction and gene expression to morphological changes in key
organelles such as autophagosomes and mitochondria, which our work has implicated in regulation of the
dynamic kinase activity being studied.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
DOI:
10.3389/fcell.2018.00044
发表时间:
2018
期刊:
Frontiers in cell and developmental biology
影响因子:
5.5
作者:
[Davies AE, Albeck JG]
通讯作者:
Albeck JG
DOI:
10.1042/ebc20180024
发表时间:
2018-10-26
期刊:
Essays in biochemistry
影响因子:
6.4
作者:
[Albeck JG, Pargett M, Davies AE]
通讯作者:
Davies AE
Decoding temporal epithelial signaling programs to restore homeostasis in acute lung injury
-
批准号:10297749
-
项目类别:
-
资助金额:$59.34万
-
财政年份:2021
-
负责人:John G. Albeck
-
依托单位:
Decoding temporal epithelial signaling programs to restore homeostasis in acute lung injury
-
批准号:10673694
-
项目类别:
-
资助金额:$60.6万
-
财政年份:2021
-
负责人:John G. Albeck
-
依托单位:
Control of gene expression by dynamic metabolic oscillations
-
批准号:10461717
-
项目类别:
-
资助金额:$37.81万
-
财政年份:2021
-
负责人:John G. Albeck
-
依托单位:
Control of gene expression by dynamic metabolic oscillations
-
批准号:10668353
-
项目类别:
-
资助金额:$37.72万
-
财政年份:2021
-
负责人:John G. Albeck
-
依托单位:
The role of dynamics in defining the limits of normal developmental signaling.
-
批准号:9980924
-
项目类别:
-
资助金额:$30.98万
-
财政年份:2016
-
负责人:John G. Albeck
-
依托单位:
The role of dynamics in defining the limits of normal developmental signaling.
-
批准号:9505933
-
项目类别:
-
资助金额:$31.33万
-
财政年份:2016
-
负责人:John G. Albeck
-
依托单位:
The role of dynamics in defining the limits of normal developmental signaling.
-
批准号:9893735
-
项目类别:
-
资助金额:$5.0万
-
财政年份:2016
-
负责人:John G. Albeck
-
依托单位:
The role of dynamics in defining the limits of normal developmental signaling.
-
批准号:9324287
-
项目类别:
-
资助金额:$31.48万
-
财政年份:2016
-
负责人:John G. Albeck
-
依托单位:
海外基金