Resource Core
Resource Core
批准号:
10398389
负责人:
Eli Eisenberg
金额:
$73.73万
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
已结题
起止时间:
2021-09-23 至 2024-08-31
关键词:
AdenosineAdultAffectAfferent NeuronsAmino AcidsAnalgesicsAnimal ModelArginineBCAR1 geneBase PairingBenchmarkingBioinformaticsCardiacCell modelCellsCodeCodon NucleotidesComplementary DNAComputer AnalysisCorrelation StudiesDNADNA sequencingDataData AnalysesData SetDetectionDiabetes MellitusDideoxy Chain Termination DNA SequencingDisease modelEffectivenessElectrophysiology (science)EnsureEnzymesExperimental DesignsFDA approvedFutureGeneticGoalsGuanosineGuide RNAHeart DiseasesHumanIndividualInfrastructureInosineInstitutionIonsLysineMalignant - descriptorMalignant NeoplasmsMessenger RNAMethodsMonitorMusNeuronsOutcomeOverdosePain DisorderPatientsPeripheralPermeabilityPharmaceutical PreparationsPopulationPrevalenceProcessPropertyProtein IsoformsProteinsRNARNA EditingReagentResearchResearch PersonnelResourcesReverse Transcriptase Polymerase Chain ReactionReverse TranscriptionRoleSample SizeSamplingShunt DeviceSignal TransductionSiteSodium ChannelSpecificityStatistical Data InterpretationSystemTestingTherapeuticVariantWorkaddictionbasebioinformatics pipelinechannel blockerschronic painde novo mutationdesigndisabilitydsRNA adenosine deaminaseexome sequencingexperimental analysisimmunogenicmembernovelopioid abusepain modelprocess optimizationreference genomeside effectsmall moleculetargeted treatmenttooltranscriptometranscriptome sequencingvoltage
中文摘要
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英文摘要
Chronic pain is a leading cause of disability, affecting about one-third of adults worldwide, with a prevalence
greater than heart disease, cancer, and diabetes combined. Misuse and abuse of opiates have led to a
nationwide addiction and overdose crisis. Thus, there is an urgent need for alternative, non-addictive analgesics.
Non-selective voltage-gated sodium channel (Nav) blockers are among existing non-addictive FDA-approved
drugs which can sometimes provide symptomatic relief for patients. However, their utility is limited by CNS and
cardiac side effects. Genetic and functional studies of human pain disorders and animal models of pain have
validated NaV1.7, a voltage-gated Na Channel that is preferentially expressed in peripheral neurons, as an
attractive target for therapy. Isoform-selective Nav blockers, however, are difficult to generate and those that
have been generated are rapidly cleared from the body, limiting their effectiveness. Alternative approaches are
needed. We propose a novel, non-addictive approach to treat chronic pain by editing the messages that encode
NaV1.7 in order to alter its electrophysiological properties. By changing a single lysine codon to arginine in the
ion selectivity filter, the channel will go from being Na+ selective to both Na+ and K+ selective, effectively creating
a counter-current shunt that will dampen excitability.
Site-Directed RNA Editing (SDRE) refers to novel mechanisms to generate programmed edits within RNAs.
It relies on the ADAR (Adenosine Deaminase that Acts on RNA) enzymes, which are endogenously expressed
in human cells, including sensory neurons. Directed by a guide RNA (gRNA), SDRE systems convert precisely
selected adenosines to inosine, a translational mimic for guanosine, which can recode specific amino acids. Off-
target RNA editing is a significant consideration for SDRE that must be taken into account as part of reagent
design. For use as an analgesic, editing mRNA is preferable to DNA because it is transient, thus limiting potential
off-target effects, including malignant transformations and ADARs are endogenous while enzymes for DNA
manipulation (e.g. Cas proteins) are not, thus SDRE will not be as immunogenic. Compared to small molecule
channel blockers, SDRE can be more specific, because it relies on Watson-Crick base-pairing of gRNAs for
targeting, and its effects are likely longer lasting because they will remain as long as the edited channels are
expressed. We propose to use SDRE to edit NaV1.7 K1395R to render the channel permeable to both Na+ and
K+. The purpose of the Resource Core is to supply all investigators involved in this project with the required RNA
editing quantification and statistical analyses. Primarily, the Resource Core will quantify on-target and off-target
RNA editing activity for the various experimental systems to be used by the different research components, from
cells to mice. We will introduce off-target analysis as an integral part of the reagent optimization process. In
addition, the Resource Core will provide the statistical guidance required for experimental design and analysis.
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