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Predoctoral Training Program in Biological Data Science at Brown University

Predoctoral Training Program in Biological Data Science at Brown University
布朗大学生物数据科学博士前培训项目
批准号:
10447019
负责人:
Sohini Ramachandran
金额:
$31.09万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-07-01 至 2023-06-30

项目摘要

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PROJECT SUMMARY (1 page/30 lines). In this era of Big Data, building a successful and independently funded biomedical research program requires fluency in both biological data (experimental data generation, bioinformatics, and statistical inference) and theory relevant to living systems (analytical modeling, computational simulation, and evolutionanry theory). This dichotomy is challenging to address in doctoral training: biology students are rarely trained to develop or critique new quantitative methods, and quantitative students analyzing biological data rarely gain depth in biological data generation. There is an urgent need to curb fragmented efforts to address these challenges, and to instead develop a centralized community and training program focused on fostering Biological Data Scientists: scientists whose research leverages observed patterns in biological data to generate new models and hypotheses for biological processes and systems. The objective of this Predoctoral Training Program in Biological Data Science at Brown University is to turn “I-shaped” predoctoral students — with strength in one discipline — into “pi-shaped” Biological Data Scientists with two core strengths: (1) generating and analyzing biological data, and (2) developing theoretical models for and testable hypotheses regarding biological processes. This centralized community at Brown University will be maintained by 28 engaged, crossdisciplinary faculty preceptors who will mentor four NIH-supported predoctoral trainees each year along with 4 Brown University-supported trainees each year (resulting in 40 Biological Data Scientists over 5 years) in a variety of didactic, research, and career development activities for one year. These activities will include a new year-long graduate seminar, crossdisciplinary research rotations, a program retreat for faculty and trainees, and a series of roundtable discussions focusing on professional development for interdisciplinary researchers. The resulting community will promote the development of skills essential for interdisciplinary biomedical research, including the ability to communicate science to both broad and field- specific audiences, navigate interdisciplinary collaboration and grant applications, interview for academic and industry-based research careers, and conduct reproducible and open science. The faculty preceptors' research programs cover multiple biological organisms, systems, and problems, ranging across evolutionary genetics, functional genomics, biological networks, molecular biology of aging, developmental robustness, biomedical informatics, regulation of immunity, and biological physics. Further, the preceptors have a combined annual research funding base of over $12 million in direct costs, offering a strong foundation to bolster this innovative training program. This training program will yield investigators equipped to extract new insights into living systems from complex biological datasets.
期刊论文(27)
专著(0)
科研奖励(0)
会议论文
Heuristic bias in stem cell biology.
干细胞生物学中的启发式偏差。
DOI: 10.1186/s13287-019-1355-1
发表时间: 2019
期刊: Stem cell research & therapy
影响因子: 7.5
作者: [Quesenberry,Peter, Borgovan,Theo, Nwizu,Chibuikem, Dooner,Mark, Goldberg,Laura]
通讯作者: Goldberg,Laura
DOI: 10.1016/j.ajhg.2022.03.005
发表时间: 2022-05-05
期刊: American journal of human genetics
影响因子: 9.8
作者: []
通讯作者:
DOI: 10.1371/journal.pgen.1010399
发表时间: 2023-08
期刊: PLoS genetics
影响因子: 4.5
作者: []
通讯作者:
Out of destruction comes new growth: Pore-forming antimicrobials make pancreas grow.
破灭后会产生新的生长:成孔抗菌剂使胰腺生长。
DOI: 10.1016/j.cmet.2022.10.006
发表时间: 2022
期刊: Cell metabolism
影响因子: 29
作者: [Yunker,Rebecca, Bonakdar,Maryam, Vaishnava,Shipra]
通讯作者: Vaishnava,Shipra
19
    Novel population-genetic methods for localizing targets of natural selection in diverse human genomes
    • 批准号:
      10321900
    • 项目类别:
    • 资助金额:
      $37.4万
    • 财政年份:
      2021
    • 负责人:
      Sohini Ramachandran
    • 依托单位:
    Novel population-genetic methods for localizing targets of natural selection in diverse human genomes
    • 批准号:
      10538648
    • 项目类别:
    • 资助金额:
      $37.45万
    • 财政年份:
      2021
    • 负责人:
      Sohini Ramachandran
    • 依托单位:
    Predoctoral Training Program in Biological Data Science at Brown University
    • 批准号:
      10405983
    • 项目类别:
    • 资助金额:
      $8.64万
    • 财政年份:
      2018
    • 负责人:
      Sohini Ramachandran
    • 依托单位:
    Predoctoral Training Program in Biological Data Science at Brown University
    • 批准号:
      10197955
    • 项目类别:
    • 资助金额:
      $29.26万
    • 财政年份:
      2018
    • 负责人:
      Sohini Ramachandran
    • 依托单位:
    海外基金