Mechanisms and Consequences of Gene Induction by Glucocorticoids in Airway Smooth Muscle

糖皮质激素在气道平滑肌中基因诱导的机制和后果

• 批准号: 10446915
• 负责人: ANTHONY N GERBER
• 金额: $ 75.96万
• 依托单位: NATIONAL JEWISH HEALTH
• 依托单位国家: 美国
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-04-15 至 2026-02-28
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10446915
• 关键词: Address; Advanced Development; American; Anti-Inflammatory Agents; Applications Grants; Asthma; Binding; Biochemical; Bioinformatics; Biological Assay; Cells; ChIP-seq; Chromatin; Chromatin Loop; Clinical; Complex; DNA; DNA Sequence; Data; Data Set; Disease; Enhancers; Exhibits; Family; Functional disorder; Gene Expression; Gene Expression Regulation; Genes; Genetic; Genetic Transcription; Genomic approach; Genomics; Glucocorticoid Receptor; Glucocorticoids; Goals; Health Care Costs; Human; Immune; Infection; Inflammation; Inflammatory; Inhalation; Knowledge; Ligand Binding; Ligands; Link; Lung; Mediating; Methods; Modeling; Molecular; Molecular Conformation; Muscle function; Odds Ratio; Pathogenesis; Pathway interactions; Patients; Persons; Pharmaceutical Preparations; Pharmacogenomics; Pharmacology; RNA; Receptor Signaling; Regulation; Reporter; Repression; Research; Response Elements; Risk; Signal Pathway; Signal Transduction; Single Nucleotide Polymorphism; Site; Slice; Small Interfering RNA; Steroids; Symptoms; Systemic Therapy; Testing; Therapeutic; Therapeutic Effect; Tissues; Transcript; Transcriptional Regulation; Viral; analysis pipeline; asthma exacerbation; asthmatic patient; base; cell type; chromosome conformation capture; cytokine; gene induction; genetic association; genetic signature; genome-wide; genomic signature; glycosyltransferase; improved; knock-down; member; novel; novel therapeutics; promoter; receptor; receptor binding; respiratory smooth muscle; response; side effect; therapeutic evaluation; transcription factor; translational approach; translational model; virtual

Glucocorticoids (GCs, generically known as “steroids”) are exceptionally effective drugs in the control of a wide variety of immune-mediated diseases, including asthma. They are also used to treat viral-induced inflammation in the context of asthma exacerbations. Through reducing inflammation in tissues such as airway smooth muscle (ASM), inhaled GCs are very effective in the majority of asthma patients, whereas systemic therapy, which causes side effects, is used to treat asthma exacerbations. Despite using best therapies, over one million Americans continue to be afflicted with difficult-to-control asthma and frequent exacerbations. Thus, new pharmacologic approaches aimed at steroid signaling mechanisms in the lung, including ASM, are urgently needed to improve treatment for asthma. GCs primary biochemical function is to bind to the GC receptor (GR), leading to regulation of transcription directly by GR, which is a transcription factor. ASM is a key target tissue of GCs in asthma, and ASM exhibits hyper-contractility, remodeling and exuberant cytokine expression in asthma. Previous efforts to exploit steroid- controlled pathways as a method to improve asthma therapies directed at ASM have been predicated on the so called “transrepression” model of GR activity, in which GR is thought to reduce inflammation by antagonistic tethering to pro-inflammatory transcription factors such as NFkB. Entirely contrary to dogma, this grant application is focused instead on transcriptional induction by GR and cooperation between GR and NFkB. Our preliminary data implicate GR-NFkB cooperation as central to controlling inflammation in ASM, thus likely contributing significantly to efficacy of steroids. Mechanistically, our data suggest this pathway involves transcription of enhancer RNAs and formation of chromatin loops, and our data also suggest this mechanism is druggable. Based on our promising findings on GR-induced pathways, we have also created a novel method to interrogate GR-induced enhancer RNA signatures for genetic links to asthma. Our overarching hypothesis is that GR-mediated transcriptional induction and GR-NFkB cooperation in ASM is crucial for steroid efficacy in asthma and these pathways are linked to risk of developing asthma. We will test this hypothesis with three specific aims, which will also address crucial molecular knowledge gaps. In Aim 1, we will determine the comprehensive set of enhancer RNAs that are induced cooperatively by GR/NFkB and determine if these enhancer RNAs loop to the promoters of anti-inflammatory genes. In Aim 2, we will determine the DNA sequence requirements and additional factors involved in cooperative regulation by GR and NFkB, and we will test the therapeutic relevance of this pathway in translational models. In Aim 3, we will identify novel genetic associations between SNPs, GR-induced enhancers and asthma, and we will determine the relevance of these SNPs to GR signaling and ASM function.

糖皮质激素（GC，一般称为“类固醇”）是控制广泛的 各种免疫介导的疾病，包括哮喘。它们也用于治疗病毒引起的炎症 在哮喘急性发作的情况下。通过减少气道平滑肌等组织的炎症 (ASM)，吸入GC对大多数哮喘患者非常有效，而全身治疗， 会引起副作用，用于治疗哮喘恶化。尽管使用了最好的疗法， 美国人继续受到难以控制的哮喘和频繁恶化的折磨。由此可见，新 针对肺中类固醇信号传导机制的药理学方法，包括ASM，迫切需要 需要改善哮喘的治疗。 GC的主要生化功能是与GC受体（GR）结合，从而调节转录 GR是一种转录因子。在哮喘中，ASM是GC的关键靶组织，并且ASM表现出 哮喘中的过度收缩、重塑和细胞因子表达旺盛。以前开发类固醇的努力- 控制途径作为一种方法，以改善哮喘治疗针对ASM已被预测的基础上， 称为GR活性的“反式阻遏”模型，其中GR被认为通过拮抗性抑制来减少炎症， 与促炎性转录因子如NF κ B连接。与教条完全相反，这项赠款 相反，应用集中于GR的转录诱导以及GR和NF κ B之间的合作。我们 初步数据暗示GR-NFkB合作是控制ASM炎症的核心，因此可能 对类固醇的功效有显著的贡献。从机制上讲，我们的数据表明，这一途径涉及 增强子RNA的转录和染色质环的形成，我们的数据也表明这种机制是 可下药的基于我们对GR诱导途径的有希望的发现，我们还创造了一种新的方法， 研究GR诱导增强子RNA信号与哮喘的遗传联系。我们的首要假设是 GR介导的转录诱导和GR-NFkB在ASM中的合作对于类固醇在 哮喘和这些途径与发展哮喘的风险有关。我们将用三个例子来检验这个假设。 具体目标，这也将解决关键的分子知识差距。在目标1中，我们将确定 GR/NFkB协同诱导的一组全面的增强子RNA，并确定这些增强子RNA是否 增强子RNA环到抗炎基因的启动子。在目标2中，我们将确定DNA序列 GR和NFkB合作调节中涉及的要求和其他因素，我们将测试 这一途径在翻译模型中的治疗相关性。在目标3中，我们将确定新的遗传关联 SNPs、GR诱导的增强子和哮喘之间的关系，我们将确定这些SNPs与GR的相关性， 信号和ASM功能。