Synergy Core (SynC)
Synergy Core (SynC)
批准号:
10493704
负责人:
Eric Otto Johnson
金额:
$51.38万
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-09-15 至 2027-05-31
关键词:
AddressAnimal ModelBiologicalCloud ComputingCollaborationsCommunitiesCommunity IntegrationCommunity ServicesDataData AnalysesData SetData Storage and RetrievalDevelopmentDoctor of PhilosophyDocumentationEnsureEnvironmentEpidemiologyEquationGene TargetingGeneticGenomicsHigh Performance ComputingHumanImageIndividualInfrastructureIngestionInternationalIntuitionLaboratoriesLinkage DisequilibriumMeta-AnalysisMetadataMethodsMissionMultiomic DataNeurobiologyOnline SystemsOpiate AddictionPerformancePhenotypePopulationPopulation HeterogeneityPrincipal InvestigatorProceduresQuality ControlResearchResearch PersonnelResolutionResource InformaticsResourcesSamplingSecureSourceStandardizationStructureStudy modelsSumSupercomputingTechniquesTechnologyTestingVariantaddictionanalysis pipelinebasecomputerized data processingcost effectivedata ingestiondata pipelinedata portaldata sharingdata sharing networksdata visualizationexperimental studyfollow-upgene networkgenome wide association studyhuman datahuman modelimprovedmemberonline resourcepower analysisrepositorystatisticssynergismtooluser-friendlyweb portalworking group
中文摘要
点击翻译按钮获取中文摘要
英文摘要
PROJECT SUMMARY/ABSTRACT
The Synergy Core (SynC) will support the overall mission of the Integrative Omics Center for Accelerating
Neurobiological Understanding of Opioid Addiction (ICAN) to discover and share biological drivers of opioid
addiction (OA) by coordinating a unified and rigorous approach to analyses across ICAN, providing highly
advanced computing infrastructure for ICAN analyses, combining external OA data with ICAN data, and
creating a unique national resource that shares data and results from ICAN analyses with the research
community via a user friendly web-based data portal, mapOA. Each ICAN Project will provide important stand-
alone discoveries but combining and integrating across Projects will enhance statistical power through meta-
analyses, illuminate the potential function of statistical associations (for example, mapping significant loci to
functional gene targets), provide a biologically integrated interpretation through the harmonization of human
studies and animal model studies, and ultimately generate and test hypotheses about putative mechanisms.
For ICAN and the field to leap forward in understanding the individual biological variation that leads to OA,
omics integration is key. The SynC will provide cross-project and research community integration that
facilitates scientific synergy by accomplishing the following Specific Aims:
(1) align ICAN analyses with milestones set by the Center Steering Committee and coordinate
development of analytic techniques, standards, procedures, and documentation; (2) establish and maintain a
centralized high-performance computing environment and standardized pipelines for data ingestion and omics
analyses; (3) ingest and standardize external OA datasets and conduct integrative analyses across ICAN and
external data; and (4) develop a user-friendly web-based resource, mapOA, for sharing of integrated OA omics
and imaging data within ICAN and with the broader research community.
Achieving the SynC aims will dramatically increase synergistic integration of ICAN Projects by providing
investigators and the research community with mapOA for easy access to robustly QC’ed and harmonized
results from all projects and ingested publicly available data; providing a standardized HPC environment and
pipelines; and conducting integrative analyses beyond those in individual Projects. The SynC is key to making
ICAN more than the sum of its individual Projects. The SynC team is co-led by Multiple Principal Investigators
Eric Otto Johnson, PhD, and Nathan Gaddis, PhD, who bring expertise in multisite consortia coordination;
addiction research; epidemiology; high performance cloud computing infrastructure; pipeline and workflow
development; data structuring, integration, and processing; omics data analysis in diverse populations; and
data visualization. They are supported by a broad team of statisticians, bioinformaticists, and developers.
Together, they will ensure that SynC maximizes the impact of ICAN research into the biological drivers of OA.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Integrative Omics Center for Accelerating Neurobiological Understanding of Opioid Addiction (ICAN)
-
批准号:10493702
-
项目类别:
-
资助金额:$225.97万
-
财政年份:2022
-
负责人:Eric Otto Johnson
-
依托单位:
Administrative Core (AC)
-
批准号:10493703
-
项目类别:
-
资助金额:$23.55万
-
财政年份:2022
-
负责人:Eric Otto Johnson
-
依托单位:
Harnessing Knowledge of Gene Function in Brain Tissue for Discovering Biology Underlying Heroin Addiction
-
批准号:10116351
-
项目类别:
-
资助金额:$77.5万
-
财政年份:2017
-
负责人:Eric Otto Johnson
-
依托单位:
Enhancing Discovery of HIV Host Genetics using Drug Abuse and other Interactions
-
批准号:9297254
-
项目类别:
-
资助金额:$68.01万
-
财政年份:2014
-
负责人:Eric Otto Johnson
-
依托单位:
Enhancing Discovery of HIV Host Genetics using Drug Abuse and other Interactions
-
批准号:8799728
-
项目类别:
-
资助金额:$76.35万
-
财政年份:2014
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of Heroin Abuse: A Multiethnic Study
-
批准号:7761906
-
项目类别:
-
资助金额:$35.2万
-
财政年份:2009
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of Heroin Abuse: A Multiethnic Study
-
批准号:8299258
-
项目类别:
-
资助金额:$41.05万
-
财政年份:2009
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of Heroin Abuse: A Multiethnic Study
-
批准号:8325514
-
项目类别:
-
资助金额:$39.28万
-
财政年份:2009
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:7595482
-
项目类别:
-
资助金额:$72.27万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:7933511
-
项目类别:
-
资助金额:$8.82万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:7880028
-
项目类别:
-
资助金额:$72.34万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:8286311
-
项目类别:
-
资助金额:$63.84万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:7687914
-
项目类别:
-
资助金额:$73.09万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Genome-Wide Association Study of HIV-1 Host Genetics Among Injection Drug Users
-
批准号:8104014
-
项目类别:
-
资助金额:$56.56万
-
财政年份:2008
-
负责人:Eric Otto Johnson
-
依托单位:
Pathway among Co-occurring Mental/Substance Use Disorder
-
批准号:7044216
-
项目类别:
-
资助金额:$18.06万
-
财政年份:2005
-
负责人:Eric Otto Johnson
-
依托单位:
Examining Pathways among Co-occurring Mental and Substance Use Disorders
-
批准号:7126350
-
项目类别:
-
资助金额:$21.77万
-
财政年份:2005
-
负责人:Eric Otto Johnson
-
依托单位:
Examining Pathways among Co-occurring Mental and Substance Use Disorders
-
批准号:7278766
-
项目类别:
-
资助金额:$21.3万
-
财政年份:2005
-
负责人:Eric Otto Johnson
-
依托单位:
EPIDEMIOLOGY OF INSOMNIA & MENTAL ILLNESS IN ADOLESCENCE
-
批准号:6539085
-
项目类别:
-
资助金额:$32.25万
-
财政年份:2000
-
负责人:Eric Otto Johnson
-
依托单位:
EPIDEMIOLOGY OF INSOMNIA & MENTAL ILLNESS IN ADOLESCENCE
-
批准号:6088118
-
项目类别:
-
资助金额:$20.88万
-
财政年份:2000
-
负责人:Eric Otto Johnson
-
依托单位:
EPIDEMIOLOGY OF INSOMNIA & MENTAL ILLNESS IN ADOLESCENCE
-
批准号:7047397
-
项目类别:
-
资助金额:$12.55万
-
财政年份:2000
-
负责人:Eric Otto Johnson
-
依托单位:
海外基金