Bioinformatics and Data Integration Core
Bioinformatics and Data Integration Core
批准号:
10494771
负责人:
Gregory W Carter
金额:
$110.68万
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-09-01 至 2027-08-31
关键词:
AddressAgingAlzheimer&aposs DiseaseAlzheimer&aposs disease modelAlzheimer&aposs disease therapeuticBioinformaticsCallithrixCohort StudiesCommunitiesDataData AnalysesData Storage and RetrievalDiseaseEnsureFAIR principlesFoundationsFundingGenerationsGenomeGenomicsGoalsHumanHuman GeneticsHuman ResourcesImageKnowledge PortalLinkMapsMeasuresModelingMolecularMolecular ProfilingMultiomic DataOutcomePhenotypePopulationPositioning AttributeProcessProteomeProteomicsProtocols documentationQuality ControlResearchResearch PersonnelResourcesSoftware ToolsStandardizationStatistical Data InterpretationStatistical MethodsValidationbasebehavioral outcomecomputerized data processingdata formatdata integrationdata managementdata reusedesignempoweredgenome sequencinggenome-widegenomic datahuman datamolecular pathologymolecular scalemultiple omicsmultiscale datamutantopen dataresiliencesharing platformtherapeutic developmenttooltranscriptometranscriptome sequencinguptakewhole genome
中文摘要
生物信息学与数据集成核心(bdic)
英文摘要
PROJECT SUMMARY BIOINFORMATICS AND DATA INTEGRATION CORE (BDIC)
Systematic analysis of the translational relevance of marmoset models of Alzheimer’s disease will require a
centralized data management and analysis team that interacts with all Projects and Cores. To this end, the
Bioinformatics and Data Integration Core (BDIC) will: generate multi-omics data to characterize marmoset
genomes, proteomes, and transcriptomes; provide data processing and storage for sequencing, genomics, and
similar molecular data; import and curate data and results from relevant human genetic and genomic studies;
create the processes and tools to systematically align human and marmoset data for multi-scale cross-species
analyses; and create and populate a data-sharing platform for broad and open access of all data and protocols.
This core will address this goal through the following aims: (1) generate, process, and manage genome-scale
molecular data from aging outbred and mutant marmoset populations; (2) develop and apply statistical methods
for rigorous marmoset and cross-species data analysis based on matched multi-omic measures; and (3) broadly
disseminate data and protocols through open science platforms to ensure reliable replication of studies and
reuse of all marmoset data. The BDIC will build upon existing resources such as the AD Knowledge Portal, the
Agora platform, Alz-PED, and the workflows from existing NIA-funded consortia, including AMP-AD, TREAT-AD,
MODEL-AD, MOVE-AD, and Resilience-AD. We will add the outcomes of this marmoset-centered project to this
foundation to optimize translational relevance and responsible data reuse. In achieving these goals, the BDIC
will manage data and facilitate its integrated analysis in multiple contexts across multiple project components.
Internal and external researchers will be positioned to efficiently and reliably assess the disease relevance of
marmoset models and associated phenotypes. Finally, the broader research community will be empowered to
use the marmoset as a model to understand and guide their research into therapeutics for Alzheimer’s disease.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
An Explainable Unified AI Strategy for Efficient and Robust Integrative Analysis of Multi-omics Data from Highly Heterogeneous Multiple Studies
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批准号:10729965
-
项目类别:
-
资助金额:$55.2万
-
财政年份:2023
-
负责人:Gregory W Carter
-
依托单位:
Generation, Characterization, and Validation of Marmoset Models of Alzheimer's Disease
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批准号:10494769
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项目类别:
-
资助金额:$584.52万
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财政年份:2022
-
负责人:Gregory W Carter
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依托单位:
Project 2: Identify and enhance LOAD-related signatures in outbred and genetically-engineered marmosets
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批准号:10494776
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项目类别:
-
资助金额:$39.66万
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财政年份:2022
-
负责人:Gregory W Carter
-
依托单位:
Modeling the Genetic Interaction Between Klotho and APOE Alleles in Alzheimer's Disease
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批准号:10524407
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项目类别:
-
资助金额:$228.18万
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财政年份:2022
-
负责人:Gregory W Carter
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依托单位:
Generation, Characterization, and Validation of Marmoset Models of Alzheimer's Disease
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批准号:10819807
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项目类别:
-
资助金额:$77.75万
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财政年份:2022
-
负责人:Gregory W Carter
-
依托单位:
Open Drug Discovery Center for Alzheimer's Disease
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批准号:10250427
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项目类别:
-
资助金额:$731.2万
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财政年份:2019
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负责人:Gregory W Carter
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依托单位:
Open Drug Discovery Center for Alzheimer's Disease
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批准号:10017132
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项目类别:
-
资助金额:$742.01万
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财政年份:2019
-
负责人:Gregory W Carter
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依托单位:
IU/JAX/Pitt MODEL-AD: Deep Phenotyping Proteomics Year 1
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批准号:10092243
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项目类别:
-
资助金额:$41.06万
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财政年份:2016
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负责人:Gregory W Carter
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依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center: Metabolomics
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批准号:9537115
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项目类别:
-
资助金额:$17.65万
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财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center: Aging
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批准号:9930786
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项目类别:
-
资助金额:$47.55万
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财政年份:2016
-
负责人:Gregory W Carter
-
依托单位:
IU/JAX/PITT MODEL-AD Center
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批准号:10708088
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项目类别:
-
资助金额:$983.33万
-
财政年份:2016
-
负责人:Gregory W Carter
-
依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center
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批准号:9548537
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项目类别:
-
资助金额:$500.0万
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财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
Core-003
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批准号:10474014
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项目类别:
-
资助金额:$113.65万
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财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center
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批准号:10402547
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项目类别:
-
资助金额:$500.0万
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财政年份:2016
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负责人:Gregory W Carter
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依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center
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批准号:10005940
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项目类别:
-
资助金额:$615.85万
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财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
IU/JAX/Pitt MODEL-AD: Murinizing Aducanumab
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批准号:10094809
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项目类别:
-
资助金额:$39.63万
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财政年份:2016
-
负责人:Gregory W Carter
-
依托单位:
IU/JAX/PITT MODEL-AD Center: PTC Hardware
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批准号:10199223
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项目类别:
-
资助金额:$38.91万
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财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
The IU/JAX Alzheimer's Disease Precision Models Center: PTC Supplement
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批准号:9491281
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项目类别:
-
资助金额:$14.01万
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财政年份:2016
-
负责人:Gregory W Carter
-
依托单位:
Methods and Tools to Analyze Genetic Complexity
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批准号:9552885
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项目类别:
-
资助金额:$35.88万
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财政年份:2016
-
负责人:Gregory W Carter
-
依托单位:
IU/JAX/PITT MODEL-AD Center
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批准号:10590445
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项目类别:
-
资助金额:$979.08万
-
财政年份:2016
-
负责人:Gregory W Carter
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依托单位:
海外基金