A host-dependent mechanism controlling influenza virus infection by suppressing viral RNA synthesis
A host-dependent mechanism controlling influenza virus infection by suppressing viral RNA synthesis
批准号:
10555188
负责人:
Ivan Marazzi
金额:
$42.38万
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-01-10 至 2023-12-31
关键词:
AddressAffectAgreementBindingBiochemicalBiologicalCatabolismCell NucleusCellsComplementary RNAComplexCytoplasmCytoplasmic ReceptorsDNA-Directed RNA PolymeraseDataDedicationsDiseaseDouble-Stranded RNAEnzymesEpidemicExonucleaseFamilyFutureGene ExpressionGeneticGenetic TranscriptionGenomeHost Defense MechanismHumanImmune responseImmunoprecipitationIn VitroInfectionInfluenza A virusInnate Immune SystemIntegration Host FactorsKineticsKnockout MiceKnowledgeLabelLaboratoriesLightMetabolicMethodsMolecularMorbidity - disease rateMouse StrainsMusNuclearNuclear ProteinsNucleoproteinsOrthomyxoviridaePatternPattern recognition receptorPhysiologicalPolymerasePredispositionProcessProtein FamilyProteinsPublic HealthRNARNA BindingRNA DegradationRNA VirusesRNA chemical synthesisRegulationResearchResearch Project GrantsRibonucleoproteinsRoleSeasonsSignal TransductionSocietiesSpecificityTechniquesTestingViralViral GenesViral GenomeViral PathogenesisVirionVirusVirus AssemblyVirus DiseasesVirus Replicationantagonistbiotypesdisorder controlexperimental studygenome-widegenomic RNAimprovedin vivoinfluenza infectioninfluenza virulenceinfluenzavirusinsightloss of functionmolecular recognitionmortalitymouse modelnovelnovel therapeutic interventionnovel therapeuticsoverexpressionpandemic diseasepathogenreceptorrespiratory pathogensensortripolyphosphateviral RNAviral genomics
中文摘要
甲型流感病毒(IAV)是一种主要的人类呼吸道病原体,可引起季节性流行和偶尔的大流行。该病毒是一种分节的负链RNA病毒,与大多数其他RNA病毒不同,它在受感染细胞的细胞核中复制其基因组。基因组复制产生互补RNA (cRNA)和病毒基因组RNA (vRNA)。cRNA和vRNA都含有一个5'三磷酸(ppp),由先天免疫系统通过模式识别受体(PRRs)识别。细胞质传感器与流感病毒的特异性识别有关。IAV是否也能在细胞核中被识别尚不清楚。为了解决这个问题,我们根据酶的特性筛选了可能识别病毒RNA的核蛋白。我们的初步结果表明,DXO蛋白是一种具有5‘->3’焦磷酸水解酶活性的核酶,在体外和感染细胞中都能识别和降解IAV RNA。我们将通过生化和基因表达研究来研究DXO活性的机制和影响(目的1-2)。我们将使用我们最近生成的敲除小鼠模型来检测DXO在体内的活性(Aim 3)。这些研究将为病毒RNA表达如何被控制提供新的机制见解,并阐明病毒RNA分解代谢在IAV发病机制中的作用,从而指导疾病根除的新治疗途径。
英文摘要
Influenza A virus (IAV) is a major human respiratory pathogen that causes seasonal epidemics and occasional pandemics. The virus is a segmented, negative stranded RNA virus that, unlike most other RNA viruses, replicates its genome in the nucleus of infected cells. Genome replication yields a complementary RNA (cRNA) and a viral genomic RNA (vRNA). Both cRNA and vRNA contain a 5' triphosphate (ppp) which is recognized by the innate immune system by pattern recognition receptors (PRRs). Cytosolic sensors have been implicated in the specific recognition of influenza virus. Whether IAV can also be recognized in the nucleus is unknown. To address this, we screened nuclear proteins that, based on enzymatic features, may recognize viral RNA. Our preliminary results indicate that the protein DXO, a nuclear enzyme with 5'->3' pyrophosphohydrolase activity, can both recognize and degrade IAV RNA in vitro and in infected cells. We will study the mechanism and impact of DXO activity using biochemical and gene expression studies (Aims 1-2). We will examine DXO activity in vivo using a knock-out mouse model that we recently generated (Aim 3). These studies will provide novel mechanistic insights into how viral RNA expression is controlled along with elucidating the role of viral RNA catabolism in IAV pathogenesis, thus instructing new therapeutic avenues for disease eradication.
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Author Correction: Clonally expanded CD8 T cells characterize amyotrophic lateral sclerosis-4.
作者更正:克隆扩增的 CD8 T 细胞是肌萎缩侧索硬化症的特征-4。
DOI:
10.1038/s41586-022-05184-0
发表时间:
2022
期刊:
Nature
影响因子:
64.8
作者:
[Campisi,Laura, Chizari,Shahab, Ho,JessicaSY, Gromova,Anastasia, Arnold,FrederickJ, Mosca,Lorena, Mei,Xueyan, Fstkchyan,Yesai, Torre,Denis, Beharry,Cindy, Garcia-Forn,Marta, Jiménez-Alcázar,Miguel, Korobeynikov,VladislavA, Prazich,Jack, F]
通讯作者:
F
DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells.
DNMT3A单倍不足会导致成熟人类免疫细胞增强子的二分法DNA甲基化缺陷。
DOI:
10.1084/jem.20202733
发表时间:
2021-07-05
期刊:
The Journal of experimental medicine
影响因子:
--
作者:
[Lim JY, Duttke SH, Baker TS, Lee J, Gambino KJ, Venturini NJ, Ho JSY, Zheng S, Fstkchyan YS, Pillai V, Fajgenbaum DC, Marazzi I, Benner C, Byun M]
通讯作者:
Byun M
DOI:
10.1016/j.chom.2023.05.030
发表时间:
2023-06
期刊:
Cell host & microbe
影响因子:
30.3
作者:
[Nan Zhao;J. Ho;Fanye Meng;Simin Zheng;A. Kurland;Lu Tian;Martha G Rea-Moreno;Xiangyang Song;Ji-Seon Seo;H. Kaniskan;A. J. T. te Velthuis;D. Tortorella;Ya-Wen Chen;Jeffrey R. Johnson;Jian Jin;Ivan Marazzi]
通讯作者:
Nan Zhao;J. Ho;Fanye Meng;Simin Zheng;A. Kurland;Lu Tian;Martha G Rea-Moreno;Xiangyang Song;Ji-Seon Seo;H. Kaniskan;A. J. T. te Velthuis;D. Tortorella;Ya-Wen Chen;Jeffrey R. Johnson;Jian Jin;Ivan Marazzi
A small nucleosome from a weird virus with a fat genome.
来自具有脂肪基因组的奇怪病毒的小核小体。
DOI:
10.1016/j.molcel.2021.08.014
发表时间:
2021
期刊:
Molecular cell
影响因子:
16
作者:
[Vannini,Alessandro, Marazzi,Ivan]
通讯作者:
Marazzi,Ivan
Regulation of inflammatory gene expression during SARS2 infection
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批准号:10418248
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项目类别:
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资助金额:$79.49万
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财政年份:2022
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负责人:Ivan Marazzi
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依托单位:
Regulation of inflammatory gene expression during SARS2 infection
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批准号:10762311
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项目类别:
-
资助金额:$69.51万
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财政年份:2022
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负责人:Ivan Marazzi
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Role of a novel human-virus chimeric protein generated by upstream translation and genetic overprinting
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批准号:10514635
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项目类别:
-
资助金额:$21.13万
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财政年份:2021
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负责人:Ivan Marazzi
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依托单位:
Core D: Bioinformatics and Modeling Core
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批准号:10394318
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项目类别:
-
资助金额:$36.12万
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财政年份:2021
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负责人:Ivan Marazzi
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依托单位:
Role of a novel human-virus chimeric protein generated by upstream translation and genetic overprinting
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批准号:10369132
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项目类别:
-
资助金额:$25.36万
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财政年份:2021
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负责人:Ivan Marazzi
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依托单位:
Core D: Bioinformatics and Modeling Core
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批准号:10188758
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项目类别:
-
资助金额:$50.16万
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财政年份:2021
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负责人:Ivan Marazzi
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依托单位:
Core D: Bioinformatics and Modeling Core
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批准号:10602489
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项目类别:
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资助金额:$47.04万
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财政年份:2021
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负责人:Ivan Marazzi
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Dynamic regulatory network models of human response to influenza virus
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批准号:10626922
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项目类别:
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资助金额:$107.26万
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财政年份:2020
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负责人:Ivan Marazzi
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依托单位:
Dynamic regulatory network models of human response to influenza virus
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批准号:10418807
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项目类别:
-
资助金额:$90.77万
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负责人:Ivan Marazzi
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依托单位:
Dynamic regulatory network models of human response to influenza virus
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批准号:10762225
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项目类别:
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资助金额:$30.4万
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财政年份:2020
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负责人:Ivan Marazzi
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Dynamic regulatory network models of human response to influenza virus
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批准号:10240457
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项目类别:
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资助金额:$122.11万
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财政年份:2020
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负责人:Ivan Marazzi
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依托单位:
A host-dependent mechanism controlling influenza virus infection by suppressing viral RNA synthesis
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批准号:10318149
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项目类别:
-
资助金额:$42.38万
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财政年份:2019
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负责人:Ivan Marazzi
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依托单位:
A host-dependent mechanism controlling influenza virus infection by suppressing viral RNA synthesis
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批准号:10078852
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项目类别:
-
资助金额:$42.38万
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财政年份:2019
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负责人:Ivan Marazzi
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依托单位:
SETX, antiviral response and genetic diseases
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批准号:9104372
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项目类别:
-
资助金额:$42.1万
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财政年份:2015
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负责人:Ivan Marazzi
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依托单位:
Multi-level analysis of influenza virus polymerase and its role in pathogenesis
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项目类别:
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资助金额:$59.54万
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财政年份:2015
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Multi-level analysis of influenza virus polymerase and its role in pathogenesis
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资助金额:$59.54万
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