FROZEN-HYDRATED ELECTRON MICROSCOPY OF CA ATPASE
FROZEN-HYDRATED ELECTRON MICROSCOPY OF CA ATPASE
批准号:
2080393
负责人:
David L. Stokes
金额:
$17.84万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1991
资助国家:
美国
项目状态:
已结题
起止时间:
1991-07-01 至 1996-06-30
关键词:
X ray crystallography affinity chromatography calcium calcium flux calcium transporting ATPase chromium computer program /software conformation crystallization electron microscopy enzyme mechanism enzyme structure enzyme substrate freezing gold high voltage electron microscopy image processing laboratory rabbit liquid crystal membrane transport proteins molecular site phase contrast microscopy phosphoproteins phosphorylation protein purification rare earth element sarcoplasmic reticulum
中文摘要
点击翻译按钮获取中文摘要
英文摘要
CaATPase composes about 80% of the membrane protein of the sarcoplasmic
reticulum (SR) of striated muscle. Its role is to remove Ca++ from the
sarcoplasm following a muscle contraction, thereby affecting relaxation.
Similarities in the amino acid sequence of a wide range of other ATP-
dependent cation pumps have defined a distinct family, of which CaATPase is
the most thoroughly studied member. In particular, many studies have
attempted to link the events of the well-established reaction cycle to
physical locations on the molecule and low resolution structures have been
produced by electron microscopy of negatively stained specimens. We
propose to study the structure of CaATPase at high resolution, primarily by
frozen-hydrated electron microscopy. Through these studies, we aim (1) to
reveal the secondary structure that composes the molecule, (2) to locate
physical sites of substrate binding, and (3) to characterize conformational
changes that are driven by the chemical reaction cycle and that result in
the transport of calcium across the SR membrane.
Three-Dimensional Reconstruction. We propose to solve the three-
dimensional structure at high resolution by studying thin three-dimensional
crystals of detergent-solubilized CaATPase in the frozen-hydrated state.
These crystals produce electron diffraction to 4A resolution and we propose
to collect three-dimensional information by standard methods of electron
crystallography. From the resulting three-dimensional reconstruction, we
should be able to describe the arrangement (1) of transmembrane alpha-
helices, (2) of alpha-helices thought to compose the cytoplasmic stalk, and
(3) the 3 main domains of the cytoplasmic head. We also propose to solve
the structure at an intermediate resolution (15A) using long helical tubes
of CaATPase, which are induced by vanadate within the native SR membrane.
Site-Specific Labels. We propose to label specific sites on CaATPase that
will then be utilized in three-dimensional reconstruction of wither three-
dimensional crystals or helical tubes. CaATPase will be covalently
labelled with an undeca-gold complex, which will be coupled to CaATPase
either with the site-specific label DIDS or directly via a maleimide
linkage.
Conformational Changes. We propose to solve structures from three
different crystal forms, produced by conditions that stabilize different
conformational states; by comparing the structures, we hope to describe the
structural basis for these different states. In addition, we will study
the structural consequences of phosphorylation using caged-ATP and Cr-ATP.
Caged-ATP will be used for time-resolved studies, the phosphoenzyme being
trapped by rapid freezing of crystals a short time (e.g., 0.25s) after the
release of ATP by a light flash. Alternatively, Cr-ATP produces a long-
lived (days) phosphoenzyme that will be made both before and after
crystallization.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Molecular Mechanisms of Ion Transport - Equipment supplement
-
批准号:10798994
-
项目类别:
-
资助金额:$8.98万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Molecular Mechanisms of Ion Transport
-
批准号:10330684
-
项目类别:
-
资助金额:$25.87万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Molecular Mechanisms of Ion Transport
-
批准号:10600000
-
项目类别:
-
资助金额:$70.34万
-
财政年份:2022
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10083216
-
项目类别:
-
资助金额:$43.42万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10592636
-
项目类别:
-
资助金额:$1.43万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Metal Ion Transport by the Cation Diffusion Facilitator Family
-
批准号:10319967
-
项目类别:
-
资助金额:$43.42万
-
财政年份:2019
-
负责人:David L. Stokes
-
依托单位:
Potassium transport by the KdpFABC complex
-
批准号:10225328
-
项目类别:
-
资助金额:$34.14万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
Potassium transport by the KdpFABC complex
-
批准号:9982340
-
项目类别:
-
资助金额:$34.14万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
Structural Studies of P-Type ATPases
-
批准号:8712800
-
项目类别:
-
资助金额:$32.21万
-
财政年份:2014
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8313999
-
项目类别:
-
资助金额:$29.7万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
TRAINING PROGRAM IN MACROMOLECULAR STRUCTURE AND MECHANISM
-
批准号:8291301
-
项目类别:
-
资助金额:$17.86万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Transcontinental EM Initiative for Membrane Protein Structure
-
批准号:8146044
-
项目类别:
-
资助金额:$162.5万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Dual-Beam Scanning Electron Microscope for New York Structural Biology Center
-
批准号:7838100
-
项目类别:
-
资助金额:$196.84万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Training program in Molecular Biophysics
-
批准号:9319772
-
项目类别:
-
资助金额:$18.64万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8519132
-
项目类别:
-
资助金额:$19.45万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8150922
-
项目类别:
-
资助金额:$29.7万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
Transcontinental EM Initiative for Membrane Protein Structure
-
批准号:8730170
-
项目类别:
-
资助金额:$12.84万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
TRAINING PROGRAM IN MACROMOLECULAR STRUCTURE AND MECHANISM
-
批准号:7694058
-
项目类别:
-
资助金额:$8.75万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
High-throughput Pipeline for Electron Crystallography
-
批准号:8991232
-
项目类别:
-
资助金额:$9.07万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
NYU
-
批准号:8151936
-
项目类别:
-
资助金额:$32.57万
-
财政年份:2010
-
负责人:David L. Stokes
-
依托单位:
海外基金