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Analysis of the effective long time-behaviour of molecular systems

Analysis of the effective long time-behaviour of molecular systems
分子系统的有效长期行为分析
批准号:
EP/K027743/1
负责人:
Johannes Zimmer
金额:
$28.31万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2013
资助国家:
英国
项目状态:
已结题
起止时间:
2013 至 --

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中文摘要
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英文摘要
Playing golf means: moving the golf ball from the given initial position on the tee through a landscape of hills and valleys to the hole as the final location. Somewhat simplified, the aim of this project is to understand how to play golf not in the three-dimensional space we are accustomed to, but in a complicated landscape with hundreds of dimensions.While this sounds like a mathematical folly, this is what in fact happens in many complex systems, such as molecules or DNA. For example, molecules can exist in several distinctly different states, sometimes called conformations. These states can be pictured as wells of a complex energy landscape. Let us say that the molecule consists of N atoms, each described by 3 space coordinates and 3 momentum coordinates. Then the wells are in a 6N dimensional space. Starting with one conformation of the molecule (one of the wells, as the chemical equivalent of the tee), the atoms will then spend most of the time jostling around in that well before a rare spontaneous fluctuation occurs that lifts the atoms of the reactant over the barrier into the next valley, the well of the other conformation (corresponding to the hole in the golf analogy). This is an example of a so-called rare event. And while these events are indeed rare, they normally carry crucial information on the system in question. So one would like to understand and predict these transitions and rare events. However, a direct molecular simulation would need to resolve the atomistic timescale, while rare events take place on timescales which can be larger by many orders of magnitude; this renders direct simulations unfeasible even on the largest supercomputers.Instead, the aim of this project is to derive rigorously reduced models that capture the effective long-time behaviour ofhigh-dimensional complex systems. A particular focus will be on rare events and transition states. A variety of model problems will be investigated, chosen to capture key challenges present in a number of more complicated problems in various application areas.
期刊论文(10)
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会议论文
Travelling waves for a Frenkel-Kontorova chain
Frenkel-Kontorova 链的行波
DOI: 10.1016/j.jde.2017.03.046
发表时间: 2017
期刊: Journal of Differential Equations
影响因子: 2.4
作者: [Buffoni B]
通讯作者: Buffoni B
Hydrodynamic limit of condensing two-species zero range processes with sub-critical initial profiles
亚临界初始剖面冷凝两种物质零范围过程的流体力学极限
DOI: 10.48550/arxiv.1610.04358
发表时间: 2016
期刊:
影响因子: --
作者: [Dirr N]
通讯作者: Dirr N
Hydrodynamic Limit of Condensing Two-Species Zero Range Processes with Sub-critical Initial Profiles.
具有亚临界初始剖面的两种物质零程过程的流体动力学极限。
DOI: 10.1007/s10955-017-1827-6
发表时间: 2017
期刊: Journal of statistical physics
影响因子: 1.6
作者: [Dirr N]
通讯作者: Dirr N
DOI: 10.1063/1.4960748
发表时间: 2016-08-01
期刊: JOURNAL OF MATHEMATICAL PHYSICS
影响因子: 1.3
作者: [Dirr, Nicolas, Stamatakis, Marios, Zimmer, Johannes]
通讯作者: Zimmer, Johannes
Analysis of multi-scale problems in mathematical chemistry
  • 批准号:
    EP/H05023X/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $2.06万
  • 财政年份:
    2010
  • 负责人:
    Johannes Zimmer
  • 依托单位:
Mathematical Challenges of Molecular Dynamics: A Chemo-Mathematical Forum
  • 批准号:
    EP/F03685X/1
  • 项目类别:
    Research Grant
  • 资助金额:
    $9.97万
  • 财政年份:
    2008
  • 负责人:
    Johannes Zimmer
  • 依托单位:
国内基金
海外基金
多跳无线 MESH 网络中 QoS 保障算法的研究设计和性能分析