EXOCYCLIC ADDUCTS--SITE-SPECIFIC MUTAGENESIS

外环加合物--位点特异性诱变

• 批准号: 6416842
• 负责人: Arthur Patrick Grollman
• 金额: $ 11.52万
• 依托单位: STATE UNIVERSITY NEW YORK STONY BROOK
• 依托单位国家: 美国
• 财政年份: 2001
• 资助国家: 美国
• 起止时间: 2001-02-01 至 2002-01-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/6416842
• 关键词: DNA damage; DNA directed DNA polymerase; DNA repair; N glycosidase; adduct; chemical carcinogenesis; chemical models; crosslink; crystallization; endonuclease; mutagens; nuclear magnetic resonance spectroscopy; nucleic acid metabolism; site directed mutagenesis; thermodynamics; tissue /cell culture; transfection /expression vector

DESCRIPTION: (Applicant's Description) This project provides a biological focus for this program. In it, we explore molecular and cellular events involved in mutagenesis and DNA repair, relating our findings to the structure and thermodynamic properties of damaged DNA. Our experiments focus on exocyclic DNA adducts and oxidative lesions, endogenous forms of DNA damage that may play an important role in the initiation of human cancer. Using a novel double strand shuttle vector system containing a single defined DNA adduct, we propose to establish in human cells the mutagenic specificity of site-specifically placed lesions and to investigate the effects of sequence context on nucleotide misincorporation during translesion synthesis. We also will explore the repair and mutagenicity of complex DNA damages, including interstrand crosslinks and bistrand abasic sites. Increased rates of nucleotide misincorporation have been observed up to five bases away from the site of damage, suggesting these events take place in a thermodynamically destabilized region of DNA. Using purified DNA polymerases, we plan to establish efficiency and fidelity of DNA synthesis at positions remote from the lesion site, relating these effects to thermodynamic and structural properties of damaged DNA. We also will investigate the effects of proofreading on translesion synthesis. Accurate repair of DNA damage is critical to the survival of living organisms. We will examine mechanisms by which DNA repair enzymes recognize damaged DNA by determining the crystal structures of selected DNA glycosylases complexed to non-hydrolyzable substrates. In addition, we hope to isolate and characterize novel DNA glycosylases that selectively excise exocyclic adducts from DNA.

描述：（申请人描述）这个项目为这个项目提供了一个生物学的焦点。在这篇文章中，我们探讨了涉及诱变和DNA修复的分子和细胞事件，并将我们的发现与受损DNA的结构和热力学性质联系起来。我们的实验重点是外环DNA加合物和氧化损伤，内源性DNA损伤形式可能在人类癌症的开始中发挥重要作用。利用一种包含单一定义DNA加合物的新型双链穿梭载体系统，我们提出在人类细胞中建立位点特异性病变的诱变特异性，并研究序列背景对翻译合成过程中核苷酸错误结合的影响。我们还将探讨复杂DNA损伤的修复和诱变性，包括链间交联和双链基本位点。在距离损伤位点5个碱基处观察到核苷酸错误掺入率的增加，这表明这些事件发生在DNA的热力学不稳定区域。利用纯化的DNA聚合酶，我们计划在远离损伤部位的位置建立DNA合成的效率和保真度，并将这些影响与受损DNA的热力学和结构特性联系起来。我们还将研究校对对翻译合成的影响。DNA损伤的准确修复对生物体的生存至关重要。我们将研究DNA修复酶通过确定与非水解底物络合的选定DNA糖基酶的晶体结构来识别受损DNA的机制。此外，我们希望分离和表征新的DNA糖基酶，选择性地从DNA中去除外环加合物。