Role of K8 bZip Protein in KSHV Lytic DNA Replication

K8 bZip 蛋白在 KSHV 裂解性 DNA 复制中的作用

• 批准号: 6553900
• 负责人: YAN YUAN
• 金额: $ 18.35万
• 依托单位: UNIVERSITY OF PENNSYLVANIA
• 依托单位国家: 美国
• 财政年份: 2002
• 资助国家: 美国
• 起止时间: 2002-09-30 至 2007-02-28
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/6553900
• 关键词: DNA replication; DNA replication origin; Kaposi's sarcoma; autoradiography; binding sites; gene expression; genetic library; genetic mapping; genetic regulatory element; human herpesvirus 8; immunoprecipitation; mass spectrometry; molecular cloning; nucleic acid sequence; plasmids; protein protein interaction; protein purification; protein structure; protein structure function; site directed mutagenesis; transfection; transport proteins; virus DNA; virus protein; virus replication

DESCRIPTION (provided by applicant): Kaposi's sarcoma-associated herpesvirus (KSHV), also called human herpesvirus8 (HHV-8), is a human tumor virus which is associated with Kaposi' s sarcoma and several lymphoproliferative diseases. Phylogenetic analysis of KSHV genomic sequence revealed that KSHV belongs to the gamma-herpesvirus family, which characteristically establishes latent infection in lymphoid cells. When latency is disrupted, viruses can switch to lytic life cycle. In general, herpesviruses utilize different origins of replication during latent versus lytic infection. Latent DNA replication depends on the cellular DNA replication machinery, whereas lytic cycle DNA replication requires virally encoded replication proteins. In lytic DNA replication, the lytic origin (ori-Lyt) is bound by a virus-specified origin-binding protein (OBP) that recruits the core replication machinery. Although six core replication proteins have been identified in KSHV, an OBP and the ori-Lyt of KSHV were unidentified. Recently, some progresses were made in our laboratory. (i) two regions in the KSHV genome, between K4.2 and K5 and between K12 and ORF71, were found to be able to serve as origins for lytic cycle-specific DNA replication; (ii) a KSHV-encoded bZip protein K8 was found to bind to a sequence within KSHV ori-Lyt by an in vitro binding site selection assay. These two discoveries opened an avenue to study the mechanism of KSHV lytic DNA replication. In the proposed studies, we will investigate the mechanism of KSHV lytic DNA replication. Emphasis will be placed on the role of K8 bZip protein in the lytic-origin dependent DNA replication. (1) KSHV ori-Zyt domain will be dissected using site-directed mutagenesis to define cis-acting requirements for viral lytic replication and map K8 binding element within the ori-Lyt. (2 ) Since the function of K8 in viral lytic DNA replication appears to be mediated through interacting with the core viral replication proteins, revelation of interaction of K8 with other proteins becomes of paramount importance in understanding the role of K8 in KSHV DNA replication. We will attempt to identify the viral or cellular proteins that are associated with K8. (3) The functional role(s) of K8 in KSHV lytic DNA replication and other events in lytic cycle will be determined by using transient DNA replication assay and by blocking K8 gene expression using the external guide sequence (EGS) technique. The proposed studies will provide an insight into KSHV lytic cycle replication.

描述（由申请人提供）：卡波西肉瘤相关疱疹病毒（KSHV），也称为人类疱疹病毒8 (HHV-8)，是一种与卡波西肉瘤和几种淋巴增生性疾病相关的人类肿瘤病毒。KSHV基因组序列的系统发育分析表明，KSHV属于γ -疱疹病毒家族，其特征是在淋巴样细胞中建立潜伏感染。当潜伏期中断时，病毒可以切换到裂解生命周期。一般来说，疱疹病毒在潜伏感染和溶解感染期间利用不同的复制起源。潜伏DNA复制依赖于细胞DNA复制机制，而裂解周期DNA复制需要病毒编码的复制蛋白。在裂解性DNA复制中，裂解起始点（ori-Lyt）与病毒特异性起始结合蛋白（OBP）结合，OBP招募核心复制机制。虽然在KSHV中鉴定了6个核心复制蛋白，但未鉴定出KSHV的OBP和ori-Lyt。最近，我们实验室取得了一些进展。(i)发现KSHV基因组中K4.2和K5之间以及K12和ORF71之间的两个区域能够作为裂解周期特异性DNA复制的起点；（ii）通过体外结合位点选择实验，发现KSHV编码的bZip蛋白K8与KSHV oli - lyt中的一个序列结合。这两项发现为研究KSHV裂解DNA复制机制开辟了途径。在本研究中，我们将探讨KSHV裂解DNA复制的机制。重点将放在K8 bZip蛋白在裂解源依赖性DNA复制中的作用。(1) KSHV的ori-Zyt结构域将使用定点诱变技术进行解剖，以确定病毒裂解复制的顺式作用要求，并在ori-Lyt中绘制K8结合元件。(2)由于K8在病毒裂解性DNA复制中的功能似乎是通过与核心病毒复制蛋白的相互作用介导的，因此揭示K8与其他蛋白的相互作用对于理解K8在KSHV DNA复制中的作用至关重要。我们将尝试识别与K8相关的病毒或细胞蛋白。(3) K8在KSHV裂解DNA复制和裂解周期中其他事件中的功能作用将通过瞬时DNA复制试验和外部引导序列（EGS）技术阻断K8基因表达来确定。拟议的研究将提供对KSHV裂解循环复制的深入了解。