Structural Biology of Sin3 Corepressor

Sin3 辅阻遏物的结构生物学

• 批准号: 6620796
• 负责人: Ishwar Radhakrishnan
• 金额: $ 24.54万
• 依托单位: NORTHWESTERN UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2002
• 资助国家: 美国
• 起止时间: 2002-04-01 至 2007-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/6620796
• 关键词: amidohydrolases; calorimetry; conformation; eukaryote; gene induction /repression; genetic transcription; nuclear magnetic resonance spectroscopy; protein binding; protein protein interaction; protein purification; protein sequence; structural biology; thermodynamics; transcription factor

DESCRIPTION (provided by applicant): Regulation of eukaryotic gene expression at the transcriptional level relies on the coordinated action of multiple protein factors. Recruitment of multi-protein cofactor complexes containing chromatin-modifying and/or chromatin-remodeling activities by sequence-specific DNA binding factors appears to be a common, highly conserved mechanism of regulating gene transcription at many promoters. The Sin3 corepressor complex is one of two major repression machineries identified thus far in mammalian cells. The negative influence on gene transcription exerted by these corepressor complexes is thought to rely in part on the action of histone deacetylases (HDACs), a group of enzymes that catalyze the hydrolysis of acetyl groups from acetylated histone substrates. The Sin3 corepressor functions as a molecular adapter specifically associating with HDAC1 and HDAC2 on the one hand and a surprisingly large and diverse group of transcription factors that play crucial roles in normal development on the other. The structural basis for such macromolecular associations, which has important implications in the strict regulation of gene transcription, is poorly understood. Our studies will address fundamental questions including, how Sin3 interacts with its targets at the atomic level, why it interacts specifically with these targets but not with others, and which residues make important contributions towards the stability of these macromolecular associations. Answers to these questions rely largely on detailed structure-function analyses. Our primary tool for these investigations will be high-resolution liquid-state NMR spectroscopy but we will also pursue biochemical and other biophysical approaches, as necessary.

描述（由申请人提供）：真核基因表达的调控 在转录水平上依赖于多个 蛋白质因素包含以下的多蛋白辅因子复合物的募集 染色质修饰和/或染色质重塑活性 DNA结合因子似乎是一种常见的，高度保守的机制， 在许多启动子上调节基因转录。Sin 3辅阻遏物复合物 是迄今为止在哺乳动物中发现的两种主要抑制机制之一， 细胞这些对基因转录的负面影响 辅阻遏物复合物被认为部分依赖于组蛋白的作用 脱乙酰酶（HDAC），一组催化乙酰水解的酶， 乙酰化组蛋白底物。Sin 3辅阻遏物的功能是 一方面是与HDAC 1和HDAC 2特异性结合的分子衔接子 以及一组数量惊人且多样化的转录因子 另一方面，在正常发育中发挥重要作用。这样的结构基础 大分子协会，这在严格的 基因转录的调控机制知之甚少。我们的研究将 解决基本问题，包括Sin 3如何与其目标相互作用， 原子水平，为什么它与这些目标特异性相互作用，而不是与 以及哪些残留物对稳定性有重要贡献 这些大分子的关联。这些问题的答案很大程度上依赖于 详细的结构功能分析。我们的主要工具 调查将是高分辨率的液态核磁共振光谱，但我们 还将酌情采用生物化学和其他生物物理方法。