Three-dimensional Molecular Pattern Recognition
Three-dimensional Molecular Pattern Recognition
批准号:
6849333
负责人:
NIELS VOLKMANN
金额:
$30.8万
依托单位国家:
美国
项目类别:
财政年份:
2002
资助国家:
美国
项目状态:
已结题
起止时间:
2002-02-01 至 2007-01-31
关键词:
Internetactinsautomated data processingbioimaging /biomedical imagingcell biologycell component structure /functioncomputer data analysiscomputer program /softwarecomputer simulationcomputer system design /evaluationcytoskeletonform /pattern perceptionimage processingintermolecular interactionmacromoleculemathematical modelmathematicsmicrotubulesmodel design /developmentmolecular assembly /self assemblymolecular dynamicsmolecular shapephysical modelprotein structure functionstructural biologytomography
中文摘要
描述(由申请人提供):细胞生物学的基本主题
研究了大分子复合物的结构-功能关系
负责细胞活动。结构生物学的一个目标是获得
描述这些大分子机器在其不同的功能
国家及其结构环境。虽然可以将大的图像
大分子组装体、亚细胞结构甚至细胞,
的电子显微镜,分辨率限制所产生的地图最
通常排除了对这些重建的直接高分辨率解释。
我们建议开发一个分子模式识别系统,
以及分子在复杂结构环境中的位置。我们
我们将把精力集中在简化的行动系统上--而且
微管相关的组件。发展的紧密耦合
方法与应用这些生物学上高度重要的
将使用组件。通过这种方式,我们将立即获得反馈,
系统在实践中的表现,同时提供有价值的见解,
系统.对于每一步,计算机生成的模型系统也将被用作
开发和评估的工具。文档、教程和一个简单的
将开发使用界面。
英文摘要
DESCRIPTION (provided by applicant): A fundamental theme in cell biology
centers on the structure-function relationships of the macromolecular complexes
responsible for cellular events. One goal of structural biology is to obtain a
description of these macromolecular machines in their different functional
states and in their structural environment. While it is possible to image large
macromolecular assemblies, sub-cellular structures and even cells with the aid
of electron microscopy, the resolution restrictions of the resulting maps most
often precludes direct high-resolution interpretation of these reconstructions.
We propose to develop a molecular pattern recognition system for identification
and location of molecules in the context of complex structural environments. We
will concentrate our efforts on simplified systems of actin- and
microtubule-related assemblies. A tight coupling of the development of the
methodology with applications to these biologically highly significant
assemblies will be employed . This way we will obtain immediate feedback as to
how the system performs in practice while providing valuable insight into those
systems. For each step, computer-generated model systems will also be used as a
tool for development and evaluation. Documentation, tutorials and an easy
to-use interface will be developed.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
An automated pipeline for macromolecular structure discovery in cellular electron cryo-tomography
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批准号:9769773
-
项目类别:
-
资助金额:$92.84万
-
财政年份:2018
-
负责人:NIELS VOLKMANN
-
依托单位:
Automated docking and modeling for electron microscopy
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批准号:8018308
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项目类别:
-
资助金额:$13.74万
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财政年份:2010
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负责人:NIELS VOLKMANN
-
依托单位:
Automated docking and modeling for electron microscopy
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批准号:7253421
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项目类别:
-
资助金额:$30.6万
-
财政年份:2006
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负责人:NIELS VOLKMANN
-
依托单位:
STRUCTURE
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批准号:7313470
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项目类别:
-
资助金额:$10.0万
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财政年份:2006
-
负责人:NIELS VOLKMANN
-
依托单位:
Automated docking and modeling for electron microscopy
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批准号:7497453
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项目类别:
-
资助金额:$30.6万
-
财政年份:2006
-
负责人:NIELS VOLKMANN
-
依托单位:
Automated docking and modeling for electron microscopy
-
批准号:7649469
-
项目类别:
-
资助金额:$30.6万
-
财政年份:2006
-
负责人:NIELS VOLKMANN
-
依托单位:
Automated docking and modeling for electron microscopy
-
批准号:7144822
-
项目类别:
-
资助金额:$31.52万
-
财政年份:2006
-
负责人:NIELS VOLKMANN
-
依托单位:
COMPUTER APPLICATIONS FOR TOMOGRAPHY SEGMENTATION AND VISUALIZATION
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批准号:7181416
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项目类别:
-
资助金额:$7.56万
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财政年份:2005
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负责人:NIELS VOLKMANN
-
依托单位:
Three-dimensional Molecular Pattern Recognition
-
批准号:6620495
-
项目类别:
-
资助金额:$30.8万
-
财政年份:2002
-
负责人:NIELS VOLKMANN
-
依托单位:
Three-dimensional Molecular Pattern Recognition
-
批准号:6699939
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项目类别:
-
资助金额:$30.8万
-
财政年份:2002
-
负责人:NIELS VOLKMANN
-
依托单位:
Three-dimensional Molecular Pattern Recognition
-
批准号:6418097
-
项目类别:
-
资助金额:$32.74万
-
财政年份:2002
-
负责人:NIELS VOLKMANN
-
依托单位:
Three-dimensional Molecular Pattern Recognition
-
批准号:7010690
-
项目类别:
-
资助金额:$30.08万
-
财政年份:2002
-
负责人:NIELS VOLKMANN
-
依托单位:
Project: 4 Molecular dynamics simulations to analyze the dynamics of Arp2/3 cmplx
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批准号:8378150
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项目类别:
-
资助金额:$36.71万
-
财政年份:--
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负责人:NIELS VOLKMANN
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依托单位:
Project-004
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批准号:9769784
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项目类别:
-
资助金额:$17.55万
-
财政年份:--
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负责人:NIELS VOLKMANN
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依托单位:
Project: 4 Molecular dynamics simulations to analyze the dynamics of Arp2/3 cmplx
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批准号:7624517
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项目类别:
-
资助金额:$41.5万
-
财政年份:--
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负责人:NIELS VOLKMANN
-
依托单位:
STRUCTURE
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批准号:7664900
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项目类别:
-
资助金额:$16.66万
-
财政年份:--
-
负责人:NIELS VOLKMANN
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依托单位:
Project: 4 Molecular dynamics simulations to analyze the dynamics of Arp2/3 cmplx
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批准号:8081738
-
项目类别:
-
资助金额:$36.98万
-
财政年份:--
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负责人:NIELS VOLKMANN
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依托单位:
Project: 4 Molecular dynamics simulations to analyze the dynamics of Arp2/3 cmplx
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批准号:8261112
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项目类别:
-
资助金额:$36.59万
-
财政年份:--
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负责人:NIELS VOLKMANN
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依托单位:
Administrative Core
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批准号:9416023
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项目类别:
-
资助金额:$12.05万
-
财政年份:--
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负责人:NIELS VOLKMANN
-
依托单位:
STRUCTURE
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批准号:7906678
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项目类别:
-
资助金额:$16.2万
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财政年份:--
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负责人:NIELS VOLKMANN
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依托单位:
海外基金