Genomic profiling of AIDS-related Plasmablastic lymphoma

艾滋病相关浆母细胞淋巴瘤的基因组分析

• 批准号: 7006283
• 负责人: Chung-Che Chang
• 金额: $ 22.85万
• 依托单位: METHODIST HOSPITAL RESEARCH INSTITUTE
• 依托单位国家: 美国
• 财政年份: 2005
• 资助国家: 美国
• 起止时间: 2005-07-27 至 2007-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7006283
• 关键词: B cell lymphoma; artificial chromosomes; clinical research; comparative genomic hybridization; disease /disorder classification; fluorescent in situ hybridization; genetic polymorphism; genome; high throughput technology; human immunodeficiency virus; human tissue; immunocytochemistry; lymphoma; mouth neoplasms; multiple myeloma; neoplasm /cancer genetics; proteomics; virus genetics; virus related neoplasm /cancer

DESCRIPTION (provided by applicant): Plasmablastic lymphoma (PL), one of the most frequent oral malignancies in human immunodeficiency virus (HIV) infected patients, has very poor prognosis despite the use of highly active antiretroviral therapy (HAART) and standard chemotherapy for diffuse large B-cell lymphoma (CHOP based regimen). Importantly, the incidence of PL has significantly increased following the introduction of HAART. By WHO Classification, PL is categorized as a subtype of diffuse large B-cell lymphoma (DLBCL) which is notably associated with HIV and Epstein Barr virus. We hypothesize that a significant subset, if not all, of PL is biologically more like plasma cell myelomas (PCM) than DLBCL. In preliminary studies, we have shown that PL and PCM share almost indistinguishable immunophenotypic expression profiles. As the initial step to test our hypothesis, the main goal of this R21 proposal is to evaluate the genetic similarities and differences among AIDS-related PL, DLBCL (AIDS-related and non AIDS-related) and PCM. We will apply array-based comparative genomic hybridization (array CGH) technology, recently developed by us and others, allowing the high-throughput analysis of DNA copy number aberrations, to determine the genomic profiles of these tumors. The findings at the genome level will then be preliminarily examined at proteome levels. If the results of this proposed study support our hypothesis, we will confirm these findings in the next phase (an R01 grant application) of study with a larger sample size. If our hypothesis is substantiated in the next phase of study, a subset of patients with AIDS-related PL may be considered for the therapeutic regimens against PCM to improve treatment outcome. Building on the findings of the first genome-wide analysis of AIDS-related PL outlined in this proposal, our long-term goals are: 1) to elucidate the pathogenesis of AIDS-related PL, 2) to identify reliable diagnostic and prognostic biomarkers useful for detection of AIDS-related PL and its progression and 3) to develop novel agents for targeted therapies to prevent and/or treat PL. Ultimately, we may be able to eliminate suffering of AIDS patients from this currently deadly disease.

描述（由申请人提供）：浆母细胞淋巴瘤（PL）是人类免疫缺陷病毒（HIV）感染患者中最常见的口腔恶性肿瘤之一，尽管使用高活性抗逆转录病毒治疗（HAART）和弥漫性大b细胞淋巴瘤的标准化疗（CHOP方案），但预后非常差。重要的是，引入HAART后，PL的发生率显著增加。根据WHO的分类，PL被归类为弥漫性大b细胞淋巴瘤（DLBCL）的一种亚型，它与HIV和Epstein Barr病毒显著相关。我们假设一个重要的子集，如果不是全部，PL在生物学上更像浆细胞骨髓瘤（PCM）而不是DLBCL。在初步研究中，我们已经表明，PL和PCM具有几乎无法区分的免疫表型表达谱。