Molecular Epidemiology of N. gonorrhoeae
Molecular Epidemiology of N. gonorrhoeae
批准号:
7021462
负责人:
RAPHAEL Paul VISCIDI
金额:
$54.51万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2002
资助国家:
美国
项目状态:
已结题
起止时间:
2002-03-01 至 2008-02-28
关键词:
Neisseria gonorrhoeaeage differencebacterial cytopathogenic effectclinical researchdisease reservoirsepidemiologygender differencegene expressiongenetic markersgenetic polymorphismgenetic recombinationgenetic screeninggenetic strainhuman population geneticshuman tissuelongitudinal human studymolecular pathologynucleic acid sequencepolymerase chain reactionsexually transmitted diseasestissue resource /registryurinalysis
中文摘要
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英文摘要
Gonorrhea is a common bacterial infection that is transmitted primarily by sexual contact. Gonococcal infections have an epidemiological pattern characterized by the concentration of infections in social or geographically defined communities termed "core groups". These "core groups" have been proposed as reservoirs for the continued transmission of infections within communities, and therefore, understanding the biological nature of the constituent organisms is important for public health control strategies. We propose to examine the molecular evolution of Neisseria gonorrhea within a community over time and in relation to epidemiological information pertaining to the host individuals. This is a collaborative effort between two experts in infectious disease and epidemiology of gonorrhea and a population geneticist. Two molecular typing methods will be used to characterize gonococcal isolates: por gene sequencing and multi-locus sequence typing (MLST) scheme, in which alleles at six housekeeping genes are characterized by sequencing approximately 500 bp internal fragments of the genes. The study has three main objectives The first is to determine temporal trends in the population genetic structure of N. gonorrhea over a 20-year period in a high prevalence community, Baltimore, MD. The second is to correlate changes in population genetic parameters with epidemiological information pertaining to the host individual's residence in a "core" or "peripheral" region. Our major hypothesis is that higher levels of genetic diversity, more intense selection pressure on the por gene, a positive growth rate, and a higher recombination rate relative to the peripheral population will characterize the population genetic structure of N. gonorrhea in the core. The third aim is to determine whether gender, age, or disseminated versus local infection influences the population genetic structure of N. gonorrhea.
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Genetic diversity of Neisseria gonorrhoeae housekeeping genes.
淋病奈瑟氏菌管家基因的遗传多样性。
DOI:
10.1128/jcm.41.1.197-204.2003
发表时间:
2003
期刊:
Journal of clinical microbiology
影响因子:
9.4
作者:
[Viscidi,RaphaelP, Demma,JamesC]
通讯作者:
Demma,JamesC
New methods for inferring population dynamics from microbial sequences.
从微生物序列推断种群动态的新方法。
DOI:
10.1016/j.meegid.2006.03.004
发表时间:
2007
期刊:
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
影响因子:
--
作者:
[Pérez-Losada,Marcos, Porter,MeganL, Tazi,Loubna, Crandall,KeithA]
通讯作者:
Crandall,KeithA
DOI:
10.1186/1471-2148-7-84
发表时间:
2007-06-01
期刊:
BMC evolutionary biology
影响因子:
3.4
作者:
[Pérez-Losada M, Crandall KA, Bash MC, Dan M, Zenilman J, Viscidi RP]
通讯作者:
Viscidi RP
Phylogenomics and molecular evolution of polyomaviruses.
多瘤病毒的系统基因组学和分子进化。
DOI:
10.1007/0-387-32957-9_3
发表时间:
2006
期刊:
Advances in experimental medicine and biology
影响因子:
--
作者:
[Crandall,KeithA, Pérez-Losada,Marcos, Christensen,RyanG, McClellan,DavidA, Viscidi,RaphaelP]
通讯作者:
Viscidi,RaphaelP
Temporal trends in gonococcal population genetics in a high prevalence urban community.
高患病率城市社区淋球菌群体遗传学的时间趋势。
DOI:
10.1016/j.meegid.2006.11.003
发表时间:
2007
期刊:
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases
影响因子:
--
作者:
[Pérez-Losada,Marcos, Crandall,KeithA, Zenilman,Jonathan, Viscidi,RaphaelP]
通讯作者:
Viscidi,RaphaelP
共 6 条
Virus-Like Particle Vaccine for SARS-CoV
-
批准号:7218604
-
项目类别:
-
资助金额:$39.78万
-
财政年份:2006
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Virus-Like Particle Vaccine for SARS-CoV
-
批准号:7035180
-
项目类别:
-
资助金额:$38.94万
-
财政年份:2006
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Virus-Like Particle Vaccine for SARS-CoV
-
批准号:7596920
-
项目类别:
-
资助金额:$39.05万
-
财政年份:2006
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Virus-Like Particle Vaccine for SARS-CoV
-
批准号:7795079
-
项目类别:
-
资助金额:$38.66万
-
财政年份:2006
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Virus-Like Particle Vaccine for SARS-CoV
-
批准号:7388873
-
项目类别:
-
资助金额:$39.05万
-
财政年份:2006
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Molecular Epidemiology of N. gonorrhoeae
-
批准号:6859397
-
项目类别:
-
资助金额:$54.19万
-
财政年份:2002
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Molecular Epidemiology of N. gonorrhoeae
-
批准号:6624151
-
项目类别:
-
资助金额:$51.08万
-
财政年份:2002
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Molecular Epidemiology of N. gonorrhoeae
-
批准号:6472573
-
项目类别:
-
资助金额:$51.18万
-
财政年份:2002
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
Molecular Epidemiology of N. gonorrhoeae
-
批准号:6710045
-
项目类别:
-
资助金额:$52.61万
-
财政年份:2002
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HUMORAL IMMUNE RESPONSE TO NATURAL CHLAMYDIAL INFECTION
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批准号:6099666
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项目类别:
-
资助金额:$6.38万
-
财政年份:1998
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
ANTIBODIES TO HPV CAPSID PROTEINS AS IMMUNITY CORRELATES
-
批准号:6170865
-
项目类别:
-
资助金额:$31.72万
-
财政年份:1998
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
ANTIBODIES TO HPV CAPSID PROTEINS AS IMMUNITY CORRELATES
-
批准号:6373722
-
项目类别:
-
资助金额:$32.79万
-
财政年份:1998
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
ANTIBODIES TO HPV CAPSID PROTEINS AS IMMUNITY CORRELATES
-
批准号:2441625
-
项目类别:
-
资助金额:$32.03万
-
财政年份:1998
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
ANTIBODIES TO HPV CAPSID PROTEINS AS IMMUNITY CORRELATES
-
批准号:2887619
-
项目类别:
-
资助金额:$33.27万
-
财政年份:1998
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HIV 1 SEQUENCE DIVERSITY AND PEDIATRIC AIDS
-
批准号:6181816
-
项目类别:
-
资助金额:$38.41万
-
财政年份:1997
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HIV 1 SEQUENCE DIVERSITY AND PEDIATRIC AIDS
-
批准号:2332304
-
项目类别:
-
资助金额:$47.14万
-
财政年份:1997
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HIV 1 SEQUENCE DIVERSITY AND PEDIATRIC AIDS
-
批准号:2673998
-
项目类别:
-
资助金额:$44.3万
-
财政年份:1997
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HIV 1 SEQUENCE DIVERSITY AND PEDIATRIC AIDS
-
批准号:2889282
-
项目类别:
-
资助金额:$37.21万
-
财政年份:1997
-
负责人:RAPHAEL Paul VISCIDI
-
依托单位:
HUMORAL IMMUNE RESPONSE TO NATURAL CHLAMYDIAL INFECTION
-
批准号:6235138
-
项目类别:
-
资助金额:$15.65万
-
财政年份:1997
-
负责人:RAPHAEL Paul VISCIDI
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依托单位:
IMMUNOLOGICAL MARKERS OF HPV INFECTION & RELATED CANCER
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批准号:2097361
-
项目类别:
-
资助金额:$23.07万
-
财政年份:1992
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负责人:RAPHAEL Paul VISCIDI
-
依托单位:
海外基金