PcG Function of YY1 in Transcription and Development

YY1 在转录和发育中的 PcG 功能

• 批准号: 7031075
• 负责人: Michael Lee Atchison
• 金额: $ 29.13万
• 依托单位: UNIVERSITY OF PENNSYLVANIA
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-04-01 至 2010-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7031075
• 关键词: DNA; DNA binding protein; Drosophilidae; RNA interference; arthropod genetics; cell cycle; cell differentiation; cell growth regulation; chromatin immunoprecipitation; developmental genetics; gene induction /repression; gene mutation; genetic regulation; genetic transcription; histones; intermolecular interaction; nucleic acid sequence; proliferating cell nuclear antigen; protein localization; protein sequence; protein structure function; site directed mutagenesis; transcription factor; ubiquitin

DESCRIPTION (provided by applicant): YY1 is a developmentally important transcription factor that regulates expression of numerous genes. The Drosophila Polycomb group (PcG) protein, Pleiohomeotic (PHO), bears sequence homology with YY1. We found that YY1 can functionally replace PHO as a PcG protein in vivo. YY1 expression in Drosophila results in PcG-dependent transcriptional repression and rescue of pho mutant flies. DNA binding by YY1 causes recruitment of PcG proteins and modification of histones by deacetylation and methylation. We found that YY1 sequences 201-226, when linked to the GAL4 DNA binding domain are necessary and sufficient for transcriptional repression. These YY1 residues physically interact with CtBP, PCNA and SUMO-1. We will address the following questions concerning YY1 PcG function: 1) What is the mechanism of PcG transcriptional repression by YY1? By ChIP assay we will determine the YY1 sequences needed for PcG recruitment to DNA and histone modification. In vivo rescue experiments will determine the sequences needed for organismal development. Genetic and ChIP approaches will determine the importance of PCNA, CtBP and SUMO-1 in YY1 medicated PcG repression. We will also explore the temporal requirements of YY1 DNA binding, PcG recruitment, and histone modification. 2) What is the mechanism of CtBP function in YY1 DNA binding and PcG repression? CtBP mutation results in reduced YY1 DNA binding and PcG recruitment in vivo. We will determine the effect of CtBP mutation on YY1 stability, DNA binding ability, intracellular location, and possible sequestration into a complex. EMSA and GST pull-down studies will explore the importance of CtBP sumoylation for interaction with YY1. We will use ChIP assays to characterize PcG binding to numerous PREs that bind to YY1. 3) How does YY1 function in mammalian PcG repression systems? A number of candidate mammalian PRE sequences have been identified that bind YY1 and other PcG proteins. We will use ChIP studies to determine whether CtBP, PCNA, or sumoylated proteins bind to mammalian PREs. We will use overexpression and RNAi knock-down of YY1, CtBP, SUMO-1 and PCNA to explore the effects on PcG recruitment, histone modification, and gene expression. PcG proteins are also implicated in muscle differentiation. Therefore, we will test the roles of YY1, CtBP, SUMO-1, and PCNA in differentation of myblasts into myotubes.

描述（由申请人提供）：YY 1是一种发育重要的转录因子，调节许多基因的表达。果蝇Polycomb group（PcG）蛋白，Pleiohameotic（PHO），与YY 1具有序列同源性。我们发现，YY 1可以在体内功能上取代PHO作为PcG蛋白。YY 1在果蝇中的表达导致PcG依赖的转录抑制和pho突变果蝇的拯救。YY 1与DNA的结合导致PcG蛋白的募集和组蛋白的去乙酰化和甲基化修饰。我们发现，YY 1序列201-226，当连接到GAL 4 DNA结合结构域是必要的和足够的转录抑制。这些YY 1残基与CtBP、PCNA和SUMO-1物理相互作用。我们将解决以下问题有关YY 1 PcG功能：1）是什么机制的PcG转录抑制YY 1？通过ChIP测定，我们将确定PcG募集到DNA和组蛋白修饰所需的YY 1序列。体内拯救实验将确定生物体发育所需的序列。遗传学和ChIP方法将确定PCNA、CtBP和SUMO-1在YY 1介导的PcG抑制中的重要性。我们还将探讨YY 1 DNA结合，PcG招募和组蛋白修饰的时间要求。2)CtBP在YY 1 DNA结合和PcG抑制中的作用机制是什么？CtBP突变导致体内YY 1 DNA结合和PcG募集减少。我们将确定CtBP突变对YY 1稳定性、DNA结合能力、细胞内定位以及可能螯合成复合物的影响。EMSA和GST下拉研究将探讨CtBP类小泛素化与YY 1相互作用的重要性。我们将使用ChIP测定来表征PcG与许多结合YY 1的PRE的结合。3)YY 1在哺乳动物PcG阻遏系统中如何发挥作用？已经鉴定了许多与YY 1和其他PcG蛋白结合的候选哺乳动物PRE序列。我们将使用ChIP研究来确定CtBP，PCNA或sumoylated蛋白是否与哺乳动物PRE结合。我们将使用YY 1，CtBP，SUMO-1和PCNA的过表达和RNAi敲低来探索对PcG募集，组蛋白修饰和基因表达的影响。PcG蛋白也参与肌肉分化。因此，我们将测试YY 1、CtBP、SUMO-1和PCNA在成肌细胞分化为肌管中的作用。