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Quantitative Measurements and Modeling of the Mitotic Checkpoint

有丝分裂检查点的定量测量和建模

基本信息

批准号：
7371808
负责人：
JAGESH V SHAH
金额：
$ 35万
依托单位：
BRIGHAM AND WOMEN'S HOSPITAL
依托单位国家：
美国
项目类别：
财政年份：
2007
资助国家：
美国
起止时间：
2007-09-28 至 2012-08-31
项目状态：
已结题

来源：
https://reporter.nih.gov/project-details/7371808
关键词：
Anaphase Aneuploidy BRCA1 gene Biochemical Biological Cancerous Cell Cycle Kinetics Cell division Cells Chromosome Segregation Chromosomes Complex Computer Simulation Congenital Abnormality Cyclin B Data Defect Diffusion Disease Disruption Employee Strikes Eukaryotic Cell Fluorescence Foundations Generations Genes Genetic Materials Genome Genome Stability Growth and Development function Hand Housing Human Human Cell Line Kinetics Kinetochores Life Link Malignant Neoplasms Marriage Measurement Measures Mediating Metaphase Methods Microscopic Microscopy Mitosis Mitotic Mitotic Checkpoint Mitotic spindle Modeling Molecular Mutate Numbers Outcome Pathway interactions Photobleaching Play Process Production Protein Dynamics Proteins Proteomics RNA Interference Rate Reaction Resolution Role Signal Pathway Signal Transduction Simulate Solid Spectrum Analysis TP53 gene Techniques Testing Therapeutic Intervention Time Treatment Protocols base chromosome loss human PTTG1 protein inhibitor/antagonist instrument instrumentation prevent research study response segregation tumor ubiquitin-protein ligase

项目摘要

DESCRIPTION (provided by applicant): Cell division is an essential feature of growth, development and renewal. Each time a cell divides an exact copy of the genome must be made and each replicated chromosome equally distributed to the progeny cells. If chromosomes are unequally distributed, the cell is said to be aneuploid - the state of having the incorrect number of chromosomes. Aneuploidy is a pathological hallmark of cancerous cells and underlies a variety of birth defects. The cellular machinery to prevent aneuploidy is called the mitotic checkpoint and acts to prevent distribution of the chromosomes until they are attached to the mitotic spindle. Unlike genes that cause hereditable cancers (e.g. Rb, BRCA1, p53 etc.), very few mitotic checkpoint genes have been found mutated in disease. However, the overwhelming evidence of aneuploidy in cancer and birth defects strongly implicates a deficiency in the mitotic checkpoint machinery. Recent observations are now converging on a model whereby genes, particularly in the kinetochore-mediated Mad2 signaling pathway, are not necessarily mutated directly, but that the expression levels of genes and thereby reduced activity of the mitotic checkpoint can result in aneuploidy. Here we propose to quantitatively measure the kinetics of kinetochore signaling in living cells and house these measurements in a predictive in silico model of checkpoint signaling. These measurements are made through the marriage of modern molecular biological techniques with cutting- edge microscopy and spectroscopy-based biophysical instrumentation. By determining the array of signals produced by unattached kinetochores to prevent untimely chromosome segregation and the rates at which these are made we will be able to develop an in silico model of the process. The model will allow us to test the quantitative perturbations of these genes in the signaling pathway. This will permit the generation of new hypotheses and experiments regarding the basic mechanisms of the mitotic checkpoint and begin to understand how subtle defects in this process may underlie disease. Quantitative measurements and in silico modeling will provide a solid foundation upon which to study the checkpoint response of varied cell lines and human tumors. Our sensitivity analyses can identify those proteins in this pathway that would be most sensitive to therapeutic intervention. Ultimately, such models may provide predictive capacity to choose chemotherapeutic/anti-mitotic treatment regimen based on the proteomic signature of a human tumor.

描述(申请人提供)：细胞分裂是生长、发育和更新的基本特征。每次细胞分裂时，必须制作基因组的精确副本，并将每个复制的染色体平均分配给后代细胞。如果染色体分布不均，细胞就被称为非整倍体--染色体数目不正确的状态。非整倍体是癌细胞的病理标志，是各种出生缺陷的基础。防止非整倍体的细胞机制被称为有丝分裂检查点，它阻止染色体的分布，直到它们附着在有丝分裂纺锤体上。与导致可遗传癌症的基因(如Rb、BRCA1、P53等)不同，很少有有丝分裂检查点基因在疾病中被发现突变。然而，癌症和出生缺陷中非整倍体的压倒性证据有力地暗示了有丝分裂检查点机制的缺陷。最近的观察结果正在趋同于一种模型，在该模型中，基因，特别是在动粒介导的MAD2信号通路中，不一定直接突变，但基因的表达水平以及由此降低的有丝分裂检查点的活性可能导致非整倍体。在这里，我们建议定量测量活细胞中动粒信号的动力学，并将这些测量置于检查点信号的预测电子模型中。这些测量是通过现代分子生物学技术与尖端显微镜和基于光谱学的生物物理仪器相结合进行的。通过确定由独立的动点产生的信号阵列来防止不及时的染色体分离，以及这些信号产生的速率，我们将能够开发这一过程的计算机模型。该模型将允许我们测试这些基因在信号通路中的定量扰动。这将允许产生关于有丝分裂检查点基本机制的新假设和实验，并开始了解这一过程中的细微缺陷可能是疾病的基础。定量测量和电子计算机建模将为研究不同细胞系和人类肿瘤的检查点反应提供坚实的基础。我们的敏感性分析可以确定这一途径中对治疗干预最敏感的蛋白质。最终，这样的模型可能提供预测能力，根据人类肿瘤的蛋白质组特征选择化疗/抗有丝分裂治疗方案。