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Understanding the TatA channel of the twin-arginine protein translocase

了解双精氨酸蛋白转位酶的 TatA 通道

基本信息

批准号：
BB/D012074/1
负责人：
Benjamin Berks
金额：
$ 27.93万
依托单位：
University of Oxford
依托单位国家：
英国
项目类别：
Research Grant
财政年份：
2007
资助国家：
英国
起止时间：
2007 至无数据
项目状态：
已结题

来源：
https://gtr.ukri.org/projects?ref=BB%2FD012074%2F1
关键词：
Understanding TatA channel twin arginine

项目摘要

Some bacterial proteins operate on the outside of the cell, for example the toxins produced by bacterial pathogens. Since all proteins are made inside the bacterium the extracellular proteins must be moved out of the cell across the normally impermeable cell membrane. This task is carried out by machines termed protein transporters that are located in the cell membrane. One type of transporter moves unfolded proteins, threading them across the membrane like string through the eye of a needle. By contrast, a second type of transporter, which we term the Tat system, moves folded proteins across the membrane. The Tat protein transport system is also found in plant chloroplasts. One essential component of the Tat system is the protein TatA. Multiple copies of TatA assemble to form a large complex. We have used electron microscopy to visualize the TatA complex. TatA forms a doughnut-shaped structure. This suggests that TatA forms a channel across the cell membrane with proteins being transported through the central hole. A surprising feature of TatA is that individual TatA complexes have different sizes, apparently because they contain different numbers of TatA proteins. It is possible that this size variation allows TatA to pack tightly around the protein that is being transported and thus prevent the co-transport of other molecules. However, the TatA complex may be flexible for a number of other plausible reasons. In this project we want to increase our understanding of how the TatA protein works. In particular we want to learn the significance of the variation in the size of the Tat complexes. The electron microscopy images are too fuzzy to allow us to determine the position or shape of individual proteins within the TatA complex. The organization of the subunits in the complex will instead be probed using methods that determine which parts of the TatA molecule are in contact with other TatA molecules by chemically tying the two proteins together. These links will also be used to determine which parts of the TatA protein have to move relative to other parts of the protein to allow TatA to carry out its function. We will investigate whether the variability in the size of the TatA complexes is linked to tailoring the size of the hole to the substrate by asking whether the size of the ring varies when transporting proteins of differing sizes. We will also test whether individual TatA proteins enter and leave the TatA complex during transport since this is a prediction of the substrate-fitting explanation of the size variations. These and other experiments are expected to give a clearer picture of the operation of TatA. The Tat system is a possible drug target because it is required for bacterial pathogenesis but is not found in humans. It is also of biotechnological interest because it could be used to secrete useful protein products.

一些细菌蛋白质在细胞外部起作用，例如细菌病原体产生的毒素。由于所有的蛋白质都是在细菌内部制造的，因此胞外蛋白质必须穿过通常不可渗透的细胞膜移出细胞。这一任务是由位于细胞膜上的蛋白质转运蛋白完成的。一种类型的转运蛋白移动未折叠的蛋白质，将它们穿过细胞膜，就像穿过针眼的线一样。相比之下，第二种类型的转运蛋白，我们称之为达特系统，将折叠的蛋白质跨膜移动。达特蛋白转运系统也存在于植物叶绿体中。达特系统的一个重要组成部分是蛋白质TatA。TatA的多个拷贝组装形成一个大的复合体。我们用电子显微镜观察了TatA复合物。TatA形成了一个甜甜圈状的结构。这表明TatA形成了一个穿过细胞膜的通道，蛋白质通过中心孔运输。TatA的一个令人惊讶的特征是，单个TatA复合物具有不同的大小，显然是因为它们含有不同数量的TatA蛋白。这种大小的变化可能使TatA紧紧地包裹在被转运的蛋白质周围，从而阻止其他分子的共同转运。然而，TatA复合物可能是灵活的，因为许多其他合理的原因。在这个项目中，我们希望增加我们对TatA蛋白如何工作的理解。我们特别想了解达特复合物大小变化的意义。电子显微镜图像太模糊，无法让我们确定TatA复合物中单个蛋白质的位置或形状。相反，复合物中亚基的组织将使用通过将两种蛋白质化学连接在一起来确定TatA分子的哪些部分与其他TatA分子接触的方法来探测。这些连接也将用于确定TatA蛋白的哪些部分必须相对于蛋白的其他部分移动，以允许TatA执行其功能。我们将研究TatA复合物的大小的可变性是否与通过询问在运输不同大小的蛋白质时环的大小是否变化来定制基底的孔的大小有关。我们还将测试单个TatA蛋白是否在运输过程中进入和离开TatA复合物，因为这是对尺寸变化的底物拟合解释的预测。这些实验和其他实验有望更清楚地了解TatA的运作情况。达特系统是一个可能的药物靶点，因为它是细菌致病所必需的，但在人类中没有发现。它也具有生物技术的意义，因为它可以用来分泌有用的蛋白质产品。