High-throughput screen for autophagy induction in cultured Drosophila myocytes

培养果蝇肌细胞自噬诱导的高通量筛选

• 批准号: 7482602
• 负责人: JONATHAN D ZIRIN
• 金额: $ 4.68万
• 依托单位: HARVARD MEDICAL SCHOOL
• 依托单位国家: 美国
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-04-01 至 2010-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7482602
• 关键词: Apoptosis; Autophagocytosis; Autophagosome; Bathing; Biological Assay; Breast; Cell Culture System; Cell Survival; Cells; Cultured Cells; Detection; Development; Disease; Double-Stranded RNA; Drosophila genus; Eukaryotic Cell; Exhibits; Experimental Designs; Fat Body; Genes; Genetic; Goals; Green Fluorescent Proteins; Hormones; Human; Human Pathology; Insulin; Invaded; Libraries; Link; LysoTracker; Malignant neoplasm of ovary; Molecular; Monitor; Muscle; Muscle Cells; Myopathy; Neurodegenerative Disorders; Nutrient; Organelles; Organism; Pathway interactions; Personal Satisfaction; Phenotype; Play; Primary Cell Cultures; Process; RNA Interference; Recycling; Regulation; Role; Signal Transduction; Sirolimus; Starvation; System; Transgenic Organisms; Validation; Yeasts; base; genome-wide analysis; high throughput screening; in vivo; insight; pathogen; response; steroid hormone; wasting

DESCRIPTION (provided by applicant): Autophagy is an evolutionarily conserved mechanism in eukaryotic cells for the bulk degradation of organelles. In yeast, this process helps to maintain cell viability by recycling nutrients during periods of starvation. Higher organisms mobilize autophagy in a wide variety of cellular, developmental, and disease contexts, including programmed cell death, the response to invading pathogens, and several human muscular and neurodegenerative disorders. Furthermore, the autophagy gene Beclin 1 is deleted in a large percentage of sporadic breast and ovarian cancers. Although the basic cellular phenotype is well characterized, and some conserved molecular components have been identified, there is little known about the regulation of autophagy. Insulin and Tor signaling play critical roles in suppressing autophagy induction. However, the molecular link between these pathways and the autophagic machinery is a mystery. My goal is to use a primary cell culture system, and the powerful genetics of Drosophila, to identify new components of the autophagy pathway. The specific aims and experimental design are as follows: (1) Establish an assay for the induction and detection of autophagy in cultured Drosophila myocytes. Atg8- GFP and lysotracker expression and localization will be monitored in cells treated with varying levels of steroid hormones and/or rapamycin. The treatments will be optimized for the subsequent screen. (2) Conduct an RNAi-based screen for genes involved in autophagy induction in the cultured cells. Cells expressing Atg8-GFP will be bathed in double-stranded RNAs to knockdown specific genes. Following hormone and/or rapamycin treatment, autophagosome formation will be assayed by Atg8-GFP localization and expression. (3) in vivo validation of screen hits in both muscle and fat body using a high quality transgenic RNAi library developed in the Perrimon lab. RNAi hairpins targeting selected hits will be expressed specifically in larval muscle and fat-body using the Gal4/UAS system, and the formation of autophagosomes assayed by Atg8- GFP and lysotracker. These studies will provide a comprehensive, genome-wide analysis of autophagy in Drosophila. Identification of genes that participate in Drosophila muscle cell autophagy will provide insights into the pathology of human muscle wasting and muscular disorders that exhibit excessive autophagy

描述（由申请人提供）：自噬是真核细胞中细胞器大量降解的进化保守机制。在酵母中，这一过程有助于在饥饿期间通过回收营养来维持细胞活力。高等生物在各种各样的细胞，发育和疾病背景下动员自噬，包括程序性细胞死亡，对入侵病原体的反应，以及几种人类肌肉和神经退行性疾病。此外，自噬基因Beclin 1在大部分散发性乳腺癌和卵巢癌中缺失。虽然基本的细胞表型已被很好地表征，并且一些保守的分子组分已被鉴定，但对自噬的调控知之甚少。胰岛素和Tor信号在抑制自噬诱导中起关键作用。然而，这些途径和自噬机制之间的分子联系是一个谜。我的目标是利用原代细胞培养系统和果蝇强大的遗传学，来鉴定自噬途径的新成分。具体目的和实验设计如下：（1）建立一种诱导和检测果蝇心肌细胞自噬的方法。将在用不同水平的类固醇激素和/或雷帕霉素处理的细胞中监测Atg 8- GFP和lysotracker的表达和定位。将针对后续筛选优化治疗。(2)对培养细胞中参与自噬诱导的基因进行基于RNAi的筛选。表达Atg 8-GFP的细胞将被浸泡在双链RNA中以敲低特定基因。在激素和/或雷帕霉素处理后，将通过Atg 8-GFP定位和表达来测定自噬体形成。(3)使用Perrimon实验室开发的高质量转基因RNAi文库在肌肉和脂肪体中进行筛选命中的体内验证。使用Gal 4/UAS系统，靶向选定命中的RNAi发夹将在幼虫肌肉和脂肪体中特异性表达，并且通过Atg 8- GFP和lysotracker测定自噬体的形成。这些研究将提供一个全面的，全基因组的果蝇自噬分析。参与果蝇肌肉细胞自噬的基因的鉴定将为人类肌肉萎缩和表现出过度自噬的肌肉疾病的病理学提供见解