Diversity Oriented Synthesis of Farnesyl Pyrophosphate Analogues as Mechanistic Probes and as Precursors to Modified Natural Products
作为机制探针和改性天然产物前体的法呢基焦磷酸类似物的多样性导向合成
基本信息
- 批准号:EP/D069580/1
- 负责人:
- 金额:$ 40.58万
- 依托单位:
- 依托单位国家:英国
- 项目类别:Research Grant
- 财政年份:2006
- 资助国家:英国
- 起止时间:2006 至 无数据
- 项目状态:已结题
- 来源:
- 关键词:
项目摘要
Sesquiterpenes are an important class of natural products that exhibit a wide variety of structural variation and biological function with applications ranging from uses as scents and oils to agrochemicals and pharmaceuticals. In contrast to this diversity they are, however, metabolites originating from a single parent compound, farnesyl pyrophospate (FPP). This incredible array of products is generated from FPP by a single class of enzyme, sesquiterpene cyclases, all of which share a common 3D structure. To understand how this stunning diversity of products is formed from one compound with such remarkable fidelity is a major challenge for modern chemical biology. Each sesquiterpene cyclase enzyme must guide neutral or carbocationic intermediates through a series of specific steps whilst preventing reaction with solvent and rearrangement to undesired by-products of very similar energy and conformation.In order to examine and solve this problem we intend to synthesise a series of FPP analogue compounds and challenge sesquiterpene cyclase enzymes with them. The synthesis of these compounds is designed in such a way that a combinatorial approach may be used in the future in order to prepare diverse libraries of these materials. In this study the compounds are designed to test the proposed mechanisms by which sesquiterpene cyclases guide FPP and intermediate materials to the sesquiterpene products. The proposed compounds bear functional groups that are designed to either stabilise or destabilise carbocationic intermediates that have been predicted to form during the formation of sesquiterpene hydrocarbons. They should therefore give predictable products when tested with our range of sesquiterpene cyclase enzymes if the proposed mechanisms of action are true. If this does not prove to be the case then they will give us information allowing us to propose mechanisms that fit all the observed experimental data. FPP analogues that prove to be substrates for these enzymes will inevitably produce sesquiterpenoid materials of novel structure and function. This will expand the range of biologically active compounds that are available to us and moreover, these compounds, which often have complex structures will have been prepared without tedious and expensive total synthesis.
倍半萜是一类重要的天然产物,具有广泛的结构变化和生物学功能,用途广泛,从香料、油脂到农用化学品和医药。然而,与这种多样性相反的是,它们是源自单一母体化合物焦磷酸法尼酯(FPP)的代谢物。这一系列令人难以置信的产品是由FPP由单一类别的酶-倍半萜环酶产生的,所有这些酶都共享一个共同的3D结构。要了解这种令人惊叹的多样化产品是如何由一种具有如此惊人保真度的化合物形成的,这是现代化学生物学面临的主要挑战。每个倍半萜环化酶必须引导中性或碳阳离子中间体通过一系列特定的步骤,同时防止与溶剂反应和重排产生能量和构象非常相似的不良副产物。为了检测和解决这个问题,我们打算合成一系列FPP类似物,并用它们来挑战倍半萜环化酶。这些化合物的合成是以这样一种方式设计的,即未来可以使用组合方法来准备这些材料的不同库。在这项研究中,化合物的设计是为了测试倍半萜环化酶引导FPP和中间体生成倍半萜产物的机制。所建议的化合物含有旨在稳定或破坏碳阳离子中间体的官能团,这些中间体已被预测在倍半萜碳氢化合物的形成过程中形成。因此,如果所提出的作用机制属实,当用我们的倍半萜环酶范围进行测试时,它们应该提供可预测的产品。如果事实证明并非如此,那么他们将给我们提供信息,让我们提出符合所有观察到的实验数据的机制。作为这些酶的底物的FPP类似物将不可避免地产生结构和功能新颖的倍半萜类物质。这将扩大我们可用的生物活性化合物的范围,而且,这些通常具有复杂结构的化合物将在没有繁琐和昂贵的全合成的情况下被制备出来。
项目成果
期刊论文数量(10)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Crystal structure of (+)-delta-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis.
- DOI:10.1021/bi900483b
- 发表时间:2009-07-07
- 期刊:
- 影响因子:2.9
- 作者:Gennadios, Heather A.;Gonzalez, Veronica;Di Costanzo, Luigi;Li, Amang;Yu, Fanglei;Miller, David J.;Allemann, Rudolf K.;Christianson, David W.
- 通讯作者:Christianson, David W.
Mechanistic insights from the binding of substrate and carbocation intermediate analogues to aristolochene synthase.
- DOI:10.1021/bi400691v
- 发表时间:2013-08-13
- 期刊:
- 影响因子:2.9
- 作者:Chen, Mengbin;Al-lami, Naeemah;Janvier, Marine;D'Antonio, Edward L.;Faraldos, Juan A.;Cane, David E.;Allemann, Rudolf K.;Christianson, David W.
- 通讯作者:Christianson, David W.
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Rudolf Allemann其他文献
Rudolf Allemann的其他文献
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{{ truncateString('Rudolf Allemann', 18)}}的其他基金
Engineering Water Capture in Terpene Synthases
萜烯合成中的工程水捕获
- 批准号:
BB/R001596/1 - 财政年份:2018
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Development of novel semiochemicals for crop protection
开发用于作物保护的新型化学信息素
- 批准号:
BB/R019681/1 - 财政年份:2018
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Traceless, non-invasive and spatiotemporal control of protein activity in cells
无痕、无创、时空控制细胞内蛋白质活性
- 批准号:
BB/P009980/1 - 财政年份:2017
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Novel semiochemicals for crop protection through synthetic biology
通过合成生物学用于作物保护的新型化学信息素
- 批准号:
BB/N012526/1 - 财政年份:2016
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Epizingiberene synthase: structure, mechanism and a template for design of bioactive chemical space underpinning insect olfaction
Epiizingiberene合酶:结构、机制和用于设计支撑昆虫嗅觉的生物活性化学空间的模板
- 批准号:
BB/M022463/1 - 财政年份:2015
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Light-responsive building blocks for synthetic biology
合成生物学的光响应构建模块
- 批准号:
BB/M006158/1 - 财政年份:2015
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Reaction-coupled dynamics in DHFR catalysis
DHFR 催化中的反应耦合动力学
- 批准号:
BB/L020394/1 - 财政年份:2014
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Controlling cell death and proliferation with encodable visible light responsive proteins
用可编码的可见光响应蛋白控制细胞死亡和增殖
- 批准号:
BB/I021396/1 - 财政年份:2012
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Protein-ligand coupled motions in DHFR catalysis
DHFR 催化中的蛋白质-配体耦合运动
- 批准号:
BB/J005266/1 - 财政年份:2012
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
Design of bioactive sesquiterpene-based chemical signals with enhanced stability
具有增强稳定性的生物活性倍半萜化学信号的设计
- 批准号:
BB/H01683X/1 - 财政年份:2011
- 资助金额:
$ 40.58万 - 项目类别:
Research Grant
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