Post-transcriptional Regulation of PPAR-g Expression by 5'-Untranslated Regions
Post-transcriptional Regulation of PPAR-g Expression by 5'-Untranslated Regions
批准号:
7648140
负责人:
JHEEM D MEDH
金额:
$16.18万
依托单位国家:
美国
项目类别:
财政年份:
--
资助国家:
美国
项目状态:
未结题
起止时间:
至
关键词:
5&apos Untranslated RegionsAffinity ChromatographyAmino AcidsAtherosclerosisBindingBinding ProteinsBiologicalBiological AssayCellsComplementary DNAComplexCulture MediaCytoplasmDactinomycinDiabetes MellitusDigestionElectrophoretic Mobility Shift AssayEnsureEnzyme-Linked Immunosorbent AssayEukaryotic CellExonsFamilyGene ExpressionGenesGenetic TranscriptionHalf-LifeHumanIn VitroIncubatedIndividualLabelLengthLigandsLuciferasesMalignant NeoplasmsMeasuresMessenger RNAMonkeysNorthern BlottingNuclear ReceptorsObesityOligonucleotidesOpen Reading FramesOryctolagus cuniculusOutcomePeptidesPhysiologic pulsePhysiologicalPost-Transcriptional RegulationProcessProtein BindingProtein IsoformsProteinsPublic HealthPulse takingRNARNA ProbesRNA SplicingRNA-Binding ProteinsRNA-Protein InteractionRadioactivityRadiolabeledRateRegulationRelative (related person)Reporter GenesReticulocytesReverse Transcriptase Polymerase Chain ReactionRibonuclease T1RoleSecondary toSequence AnalysisSpecificityStandards of Weights and MeasuresStimulusStructureSubfamily lentivirinaeSystemTechniquesTerminator CodonTherapeuticTimeTranscriptTranslatingTranslation InitiationTranslationsUndifferentiatedUntranslated RegionsUridineVariantVirusWestern Blottingbasecis acting elementcrosslinkexpression vectorhuman diseasein vivoinhibitor/antagonistinnovationmRNA DecaymRNA ExpressionmRNA StabilitymRNA cappingmacrophagemembermigrationmonocytenovelnucleasepolypeptideprotein expressionradiotracerresearch studyresponsesizestemtranscription factorultraviolet irradiation
中文摘要
PPAR-g是核受体转录因子家族中的一员,已知能调节
许多不同的基因具有不同的生理功能。共存在7个PPAR-g
此前已经在猴子和人类巨噬细胞中发现了转录异构体。大多数
不同PPAR-g转录本之间的可变性在5‘-非翻译区(5’-UTR),因此
7个转录本只编码3种不同的蛋白质亚型。
近年来,5‘-UTRs已成为真核生物细胞质中mRNA加工的主要调节因子
细胞。这种转录后调控允许蛋白质表达的快速调整,以响应
各种刺激。根据实验证据,我们推测,在5‘非编码区的序列变异
PPAR-g转录本可能调节mRNA的稳定性或翻译效率。
建议的研究集中在确定PPARg转录后调控的机制
PPAR-g 5‘-UTRs的表达。慢病毒来源的不同PPAR-g转录体的翻译
将在THP-1巨噬细胞中进行比较。对任何巨噬细胞特异性或配体诱导的要求
因素也将被确定。PPAR-g 5‘-UTR对翻译效率的影响将通过
PPAR-g全长转录本和不同PPAR-g嵌合结构的体外和体内翻译
5‘端非编码区克隆在荧光素酶报告基因的上游。PPARg的稳定性(半衰期)和衰减率
具有不同5‘-UTRs的转录本将在存在转录抑制物的情况下通过RT-PCR进行检测,
Northern印迹分析和脉冲追逐标记实验。PPAR-g 5‘-UTr特异性的存在
胞质RNA结合蛋白将通过电泳迁移率改变分析、UV交联
亲和层析。拟议的研究将解释多重基因的生物学意义。
PPAR-g转录本,并促进使用PPAR-g 5‘-UTR作为特定治疗结果的靶点。
与公共卫生相关:PPAR-g与许多人类疾病有关,包括
动脉粥样硬化、糖尿病、肥胖和某些癌症。关于转录后调控的信息
PPAR-g功能对于有效和选择性地调节不同的PPAR-g亚型至关重要。
英文摘要
PPAR-g is a member of the nuclear receptor family of transcription factors and is known to regulate
many different genes with diverse physiological functions. The presence of a total of seven PPAR-g
transcript isoforms has previously been demonstrated in monkey and human macrophages. Most of the
variability between different PPAR-g transcripts is in the 5'-untranslated region (5'-UTR), such that the
seven transcripts encode for only 3 different protein isoforms.
Recently, 5'-UTRs have emerged as major modulators of cytoplasmic mRNA processing in eukaryotic
cells. Such post-transcriptional regulation allows for rapid adjustments in protein expression in response to
various stimuli. Based on experimental evidence, we hypothesize that sequence variations in the 5' UTR of
PPAR-g transcripts may regulate mRNA stability ortranslational efficiency.
The proposed studies focus on identifying mechanisms for the post-transcriptional regulation of PPARg
expression by PPAR-g 5'-UTRs. The translation of different Lentivirus-derived PPAR-g transcript isoforms
will be compared in THP-1 macrophages. A requirement for any macrophage-specific or ligand-induced
factors will also be ascertained. Effect of PPAR-g 5'-UTR on translational efficiency will be investigated by
in-vitro and in-vivo translation of full-length PPAR-g transcripts and of chimeric constructs of different PPARg
5'-UTR cloned upstream of the luciferase reporter gene. The stability (half-life) and decay rates of PPARg
transcripts with different 5'-UTRs will be determined in the presence of transcription inhibitors by RT-PCR,
Northern blot analysis and pulse-chase radiolabeling experiments. The presence of PPAR-g 5'-UTRspecific
cytosolic RNA-binding proteins will be identified by electrophoretic mobility shift assays, UV crosslinking
and affinity chromatography. The proposed studies will explain the biological significance of multiple
PPAR-g transcripts and facilitate the use of PPAR-g 5'-UTR as targets for specific therapeutic outcomes.
Relevance to Public Health: PPAR-g are implicated in many human diseases including
atherosclerosis, diabetes, obesity and certain cancers. Information about posttranscriptional regulation of
PPAR-g function is vital for efficient and selective modulation of different PPAR-g isoforms.
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海外基金