Role of HIPK2 in Kidney Tubulointerstitial Injury

HIPK2 在肾小管间质损伤中的作用

• 批准号: 8012025
• 负责人: John Cijiang He
• 金额: $ 41.33万
• 依托单位: ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
• 依托单位国家: 美国
• 财政年份: 2010
• 资助国家: 美国
• 起止时间: 2010-07-01 至 2015-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8012025
• 关键词: AIDS-Associated Nephropathy; Accounting; African American; Animal Model; Apoptosis; Bioinformatics; Cells; Chronic Kidney Failure; Computational Biology; Consensus; DNA-Protein Interaction; Data; Data Analyses; Databases; Development; Disease; End stage renal failure; Epithelial; Epithelial Cells; Epithelium; Fibrosis; Gene Expression; Gene Expression Profiling; Genes; Graph; HIV; HIV-1; Human; In Vitro; Infection; Injury; Kidney; Kidney Diseases; Knock-out; Knockout Mice; Knowledge; Link; Links List; Mediating; Mesenchymal; Messenger RNA; Modeling; Molecular Profiling; Mus; Online Systems; Pathogenesis; Pathway Analysis; Pathway interactions; Pattern; Phosphorylation; Phosphotransferases; Protein Kinase; Protein Microchips; Proteins; Regulation; Relative (related person); Role; Seeds; Signal Pathway; Signal Transduction; Signaling Molecule; Stream; System; Systems Biology; TP53 gene; Testing; Therapeutic; Transcription factor genes; Transforming Growth Factors; Transgenic Mice; Tubular formation; Ureteral obstruction; analytical tool; base; clinically relevant; homeodomain; in vivo; interstitial; mRNA Expression; mouse model; new therapeutic target; notch protein; novel; novel strategies; programs; protein expression; protein protein interaction; public health relevance; research study; theories; tool; transcription factor; upstream kinase; vpr Genes

DESCRIPTION (provided by applicant): HIV-associated nephropathy (HIVAN) is a leading cause of end stage kidney disease among African-Americans. Despite growing knowledge of the disease mechanism, therapeutic options have been limited. While gene expression microarray has been widely applied for the study of kidney diseases, data analytical tools are quite limited. Here we propose a novel approach to link the microarray data to the upstream signaling kinase activation using computation/systems biology approach. To accomplish this, we have developed several computational programs including Gene2 Network, a system that uses protein-protein interactions and cell signaling networks to build subnetworks based on seed lists of genes, and kinase enrichment analysis (KEA), a tool that links lists of proteins to the kinases most likely regulating their activity. Using this approach to study the kidney disease in a HIV-1 transgenic mouse model (Tg26 mice), which is a well-characterized animal model for human HIVAN, we identified that homeodomain interacting protein kinase 2 (HIPK2) is a novel upstream kinase regulating the transcription factors and genes activated in kidneys of Tg26 mice. HIPK2 is known to be involved in the regulation of p53, TGF-2, Wnt/2-catenin, and Notch pathways, which are known to mediate apoptosis and fibrosis in kidney disease including HIVAN. Our preliminary data suggest that HIPK2 protein expression is increased markedly in the renal tubulo-interstitial compartment of Tg26 mice and human with HIVAN. In addition, HIPK2 mediates HIV-induced apoptosis and epithelial-mesenchymal transition (EMT) of renal tubular epithelia cells, contributing to kidney fibrosis. Based on these preliminary data we hypothesize that HIPK2 is an upstream protein kinase that mediates tubulointersitial injury in HIVAN and in other kidney diseases. To test our hypotheses, we propose the following specific aims: Specific aim 1: Examine the role of HIPK2 in vitro by confirming the role of HIPK2 in apoptosis and EMT of HIV-infected cells and by determining signaling pathways up- and down-stream of HIPK2 that are activated by HIV. Specific aim 2: Confirm the role of HIPK2 in vivo by investigating whether HIPK2 knockout mice are protected from the development of tubulointerstitial injury in the unilateral ureteral obstruction model and by assessing the effect of HIPK2 knockout on the development of tubulointerstitial injury in Tg26. PUBLIC HEALTH RELEVANCE: HIPK2 could be a novel upstream kinase activating multiple downstream pathways leading to tubulo-interstitial injury, which is a final common pathway in the progression of chronic kidney disease. HIPK2 could be a potential new therapeutic target for the treatment of HIV-associated nephropathy as well as other kidney diseases. Our studies will also provide a novel approach to link upstream signaling pathways to data from gene expression microarray, which could help us to identify key upstream kinases responsible for kidney injury in HIVAN, as well as in other diseases.

描述（由申请人提供）：hiv相关肾病（HIVAN）是非洲裔美国人终末期肾病的主要原因。尽管对疾病机制的了解不断增加，但治疗选择仍然有限。基因表达芯片已广泛应用于肾脏疾病的研究，但数据分析工具相当有限。在这里，我们提出了一种利用计算/系统生物学方法将微阵列数据与上游信号激酶激活联系起来的新方法。为了实现这一目标，我们开发了几个计算程序，包括Gene2 Network，一个利用蛋白质-蛋白质相互作用和细胞信号网络来构建基于基因种子列表的子网络的系统，以及激酶富集分析（KEA），一个将蛋白质列表与最有可能调节其活性的激酶连接起来的工具。利用这种方法研究HIV-1转基因小鼠模型（Tg26小鼠）的肾脏疾病，该模型是人类HIVAN的一个很好的动物模型，我们发现同源结构域相互作用蛋白激酶2 （HIPK2）是一种新的上游激酶，调节Tg26小鼠肾脏中活化的转录因子和基因。已知HIPK2参与p53、TGF-2、Wnt/2-catenin和Notch通路的调控，这些通路介导包括HIVAN在内的肾脏疾病的凋亡和纤维化。我们的初步数据表明，在感染HIVAN的Tg26小鼠和人的肾小管间质室中，HIPK2蛋白的表达显著增加。此外，HIPK2介导hiv诱导的肾小管上皮细胞凋亡和上皮-间质转化（EMT），促进肾纤维化。基于这些初步数据，我们假设HIPK2是一种上游蛋白激酶，在HIVAN和其他肾脏疾病中介导小管间质损伤。为了验证我们的假设，我们提出了以下具体目标：具体目标1：通过确认HIPK2在HIV感染细胞的凋亡和EMT中的作用，以及通过确定被HIV激活的HIPK2的上行和下行信号通路，来检测HIPK2在体外的作用。具体目的2：在单侧输尿管梗阻模型中，通过研究HIPK2敲除小鼠是否能保护其免受小管间质损伤的发生，以及在Tg26中评估HIPK2敲除对小管间质损伤发生的影响，确认HIPK2在体内的作用。