Role of the transcriptional intermediary factor TIF1g in vertebrate hematopoiesis

转录中间因子TIF1g在脊椎动物造血中的作用

• 批准号: 7953331
• 负责人: Xiaoying Bai
• 金额: $ 13.35万
• 依托单位: BOSTON CHILDREN'S HOSPITAL
• 依托单位国家: 美国
• 财政年份: 2010
• 资助国家: 美国
• 起止时间: 2010-09-15 至 2012-06-30
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7953331
• 关键词: Anemia; Animals; Biochemical; Blood; Bypass; Candidate Disease Gene; Cells; Chromatin; Chromatin Remodeling Factor; Chromatin Structure; Cloning; Complex; DNA Polymerase II; Data; Defect; Development; Disease; Elongation Factor; Environment; Epigenetic Process; Erythroid; Erythropoiesis; Functional disorder; GATA1 gene; Gene Expression Regulation; Genes; Genetic; Genetic Programming; Genetic Transcription; Globin; Goals; Hematological Disease; Hematology; Hematopoiesis; Hematopoietic; Higher Order Chromatin Structure; Histones; Human; Knockout Mice; Knowledge; Lead; Link; Malignant Neoplasms; Maps; Mediating; Mentors; Messenger RNA; Molecular; Nature; Organism; Pathogenesis; Pathway interactions; Pediatric Hospitals; Phase; Play; Polymerase; Process; RNA Interference; RNA Polymerase II; Regulation; Research; Role; Staging; Testing; Tissues; Training; Training Programs; Transcriptional Elongation Factors; Zebrafish; base; career; chromatin immunoprecipitation; chromatin modification; chromatin remodeling; cohesin; cohesion; design; human disease; improved; insight; leukemia; medical schools; mutant; novel; oncology; progenitor; programs; public health relevance; therapeutic target; transcription factor; transcriptional intermediary factor 1; treatment strategy

DESCRIPTION (provided by applicant): My career goal is to direct an independent research group studying the nature and function of chromatin factors that control hematopoietic cell fate. My research background in epigenetic gene regulation plus my developing expertise in zebrafish genetics and hematopoiesis provide me with the knowledge to perform the proposed research. The training program in the hematology/oncology division at Children's Hospital and Harvard Medical School provides an outstanding environment for the completion of training during the mentored phase. This will greatly facilitate my smooth transition to independence. Hematopoiesis is controlled by complicated genetic programs involving tissue-specific transcription factors and chromatin remodeling factors. Understanding the regulatory mechanism of hematopoiesis provides significant insight into the pathophysiology of human blood malignancies such as leukemia. The transcription intermediary factor TIF1? is a critical factor for hematopoiesis yet the mechanism is not well understood. Through a large-scale genetic suppressor screen using the zebrafish TIF1? mutant, I identified two suppressor mutants that can bypass the requirement of TIF1? and restore blood in TIF1?-deficient animals. Initial characterizations of these mutants suggest a fundamental role of TIF1? in regulating transcriptional elongation and chromatin remodeling during hematopoiesis. The research described in this proposal is designed to elucidate the mechanism by which TIF1??regulates these processes. Aim1 will use chromatin immunoprecipitation (ChIP) analyses to thoroughly examine the distribution of RNA polymerase II and associated histone markers on blood genes in TIF1?-deficient cells. Aim2 will use the available conditional knockout mice to investigate the function of TIF1? and its suppressors in mammalian hematopoiesis. Aim3 will focus on the in-depth characterization of the interaction between TIF1? and the cohesin chromatin remodeling complex using genetic and biochemical approaches. Completion of these aims will reveal the interplay among transcription factors, elongation factors and chromatin remodelers during hematopoiesis. Given the involvement of transcriptional elongation and chromatin modification in a variety of human disorders, these studies will advance our understanding of their roles in the pathogenesis and progression of these maladies and may also identify candidate genes or pathways that can be used for developing novel targeted treatment strategies. PUBLIC HEALTH RELEVANCE: Greater insight into the regulation of hematopoietic gene program will lead to improved treatment for hematologic disorders such as leukemia and anemia. By studying the epigenetic aspect of hematopoietic gene regulation, my research will advance our understanding of the mechanisms that controls blood formation and may identify novel regulators that will broaden possible therapeutic targets for blood diseases.

描述（由申请人提供）：我的职业目标是指导一个独立的研究小组，研究控制造血细胞命运的染色质因子的性质和功能。我在表观遗传基因调控方面的研究背景，加上我在斑马鱼遗传学和造血方面不断发展的专业知识，为我提供了进行拟议研究的知识。儿童医院和哈佛医学院血液学/肿瘤学部门的培训计划为在指导阶段完成培训提供了出色的环境。这将极大地促进我向独立的顺利过渡。 造血是由复杂的遗传程序控制，涉及组织特异性转录因子和染色质重塑因子。了解造血的调控机制为人类血液恶性肿瘤（如白血病）的病理生理学提供了重要的见解。转录中介因子TIF 1？是造血的关键因素，但其机制还不清楚。通过大规模的遗传抑制筛选使用斑马鱼TIF 1？突变体，我确定了两个抑制突变体，可以绕过TIF 1的要求？并恢复TIF 1中的血液？-缺陷动物这些突变体的初步特征表明TIF 1的基本作用？在造血过程中调节转录延伸和染色质重塑。在这项建议中描述的研究旨在阐明TIF 1？？规范这些过程。Aim 1将使用染色质免疫沉淀（ChIP）分析，以彻底检查RNA聚合酶II和相关组蛋白标记物在TIF 1？缺陷细胞Aim 2将使用现有的条件性基因敲除小鼠来研究TIF 1的功能。及其抑制因子在哺乳动物造血中的作用。目标3将侧重于深入表征TIF 1？以及使用遗传和生物化学方法的粘着蛋白染色质重塑复合物。这些目标的实现将揭示造血过程中转录因子、延伸因子和染色质重塑因子之间的相互作用。考虑到转录延伸和染色质修饰在各种人类疾病中的参与，这些研究将促进我们对它们在这些疾病的发病机制和进展中的作用的理解，并且还可以确定可用于开发新的靶向治疗策略的候选基因或途径。 公共卫生相关性：对造血基因程序调控的更深入了解将导致改善对血液系统疾病如白血病和贫血的治疗。通过研究造血基因调控的表观遗传学方面，我的研究将促进我们对控制血液形成的机制的理解，并可能确定新的调节剂，这将拓宽血液疾病的可能治疗靶点。