Stress Regulation of Non-Coding RNAs in Prefrontal Cortex

前额皮质非编码 RNA 的压力调节

• 批准号: 8048411
• 负责人: James P Herman
• 金额: $ 24.82万
• 依托单位: UNIVERSITY OF CINCINNATI
• 依托单位国家: 美国
• 财政年份: 2011
• 资助国家: 美国
• 起止时间: 2011-06-01 至 2013-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8048411
• 关键词: 3' Untranslated Regions; Affect; Algorithms; Alternative Splicing; Amino Acid Sequence; Animal Model; Animals; Behavioral Symptoms; Binding; Brain; Brain region; Brain-Derived Neurotrophic Factor; Cells; Chronic; Chronic stress; Complex; Computing Methodologies; Data; Databases; Development; Disease; Down-Regulation; Emotional Disturbance; Environmental Risk Factor; Event; Extinction (Psychology); Fright; Functional RNA; Functional disorder; Future; Gene Expression; Gene Expression Regulation; Gene Proteins; Genes; Genome Components; Growth Factor; Half-Life; Human; Hypersensitivity; In Situ Hybridization; Individual; Intervention; Life; Life Stress; Link; Longevity; Medial; Mediating; Mediator of activation protein; Mental Depression; Mental disorders; Methods; MicroRNAs; Mining; Modeling; Modification; Moods; Morphology; Mus; Neurons; Peptide Sequence Determination; Physiological; Play; Poly A; Post-Traumatic Stress Disorders; Prefrontal Cortex; Process; Protein Biosynthesis; Psychopathology; RNA-Binding Proteins; Rattus; Recording of previous events; Regimen; Regulation; Rodent; Role; Seeds; Site; Small RNA; Stress; Technology; Tissues; Translational Repression; Untranslated Regions; Variant; Vertebral column; Work; base; biological adaptation to stress; cell type; design; follow-up; gene repression; infancy; insight; interest; neurochemistry; noradrenergic; novel; pre-clinical

DESCRIPTION (provided by applicant): The medial prefrontal cortex is a primary brain mediator of stress and mood. In humans and in animal models, medial prefrontal cortical dysfunction is associated with emotional disturbances, impaired fear extinction and inefficient termination of physiological stress responses. Medial prefrontal cortex dysfunction is linked to numerous mental illnesses, the most prominent being depression and post-traumatic stress disorder, diseases that are triggered by life stress and result in long-term inappropriate stress responding. Notably, gene expression in the prefrontal cortex is exquisitely sensitive to stress exposure, with the vast majority of regulated mRNAs showing pronounced down-regulation. Recent studies have convincingly demonstrated that non-coding RNAs, including microRNAs and alternatively expressed 3'-unstranslated (3'-UTR) mRNA sequences, play a major role in mRNA down-regulation in numerous tissues, including brain. This Exploratory Proposal is designed to perform detailed analysis of prefrontal cortical non-coding RNAs (microRNAs) and 3' UTRs (mRNAs) using newly-developed deep sequencing technology, affording a heretofore unprecedented assessment of miRNA and 3-UTR regulation by chronic unpredictable stress in rat. The unpredictable stress regimen reliably models physiological and behavioral symptoms of depression, allowing for extrapolation of preclinical findings to putative mechanisms of functional dysregulation in human cortex. Aim 1 will use deep sequencing methods to provide a comprehensive and quantitative analysis of existing as well as novel chronic stress-regulated miRNAs in the prefrontal cortex of C57BL6 mice. Aim 2 will apply the deep sequencing methods to identification of chronic stress-regulated 3'-UTR sequences. In both Aims, follow-up studies will verify specific regulation of targeted miRNAs and 3'-UTR sequences in the prefrontal cortex, and use anatomical methods to localize expression to distinct cortical subregions and cell types. Identification of novel stress-regulated miRNAs and 3'-UTRs in mouse will inform our understanding of mechanisms underlying human stress-related disease, and provide possible future targets for intervention in disease processes. PUBLIC HEALTH RELEVANCE: This proposal provides an exploratory assessment of regulation of stress-regulated non-coding RNAs (i.e. microRNAs) and 3' UTRs (mRNAs) in the mouse prefrontal cortex using deep sequencing technologies, to provide insight into novel mechanisms of stress-related diseases associated with cortical dysfunction (e.g., depression). At the conclusion of these studies, we anticipate development of a heretofore unprecedented database of stress-regulated non-coding RNA regulation that can be mined to identify novel processes endangering cortical integrity in the face of prolonged stress. Identification of novel stress-regulated miRNAs and 3'-UTRs will inform our understanding of mechanisms underlying human stress-related disease, and define new avenues for intervention in cortically-mediated mental illness.

描述（由申请人提供）：内侧前额叶皮层是压力和情绪的主要大脑介质。在人类和动物模型中，内侧前额叶皮质功能障碍与情绪障碍、恐惧消退受损和生理应激反应的无效终止有关。内侧前额叶皮质功能障碍与许多精神疾病有关，最突出的是抑郁症和创伤后应激障碍，这些疾病是由生活压力引发的，并导致长期不适当的压力反应。值得注意的是，前额叶皮层中的基因表达对压力暴露非常敏感，绝大多数受调节的mRNA显示出明显的下调。最近的研究已经令人信服地证明，非编码RNA，包括microRNA和交替表达的3 '-非翻译（3'-UTR）mRNA序列，在包括脑在内的许多组织中的mRNA下调中起主要作用。本探索性提案旨在使用新开发的深度测序技术对前额叶皮质非编码RNA（microRNA）和3'UTR（mRNAs）进行详细分析，从而提供大鼠中慢性不可预测应激对miRNA和3-UTR调节的前所未有的评估。不可预测的应激方案可靠地模拟了抑郁症的生理和行为症状，允许将临床前发现外推到人类皮层功能失调的假定机制。目的1将使用深度测序方法对C57 BL 6小鼠前额叶皮层中现有的以及新的慢性应激调节的miRNA进行全面和定量分析。目的2将深度测序方法应用于慢性应激调控的3 '-UTR序列的鉴定。在这两个目标中，后续研究将验证前额叶皮层中靶向miRNA和3 '-UTR序列的特异性调节，并使用解剖学方法将表达定位于不同的皮层亚区和细胞类型。在小鼠中鉴定新的应激调节miRNAs和3 '-UTR将为我们了解人类应激相关疾病的机制提供信息，并为干预疾病过程提供可能的未来靶点。 公共卫生相关性：该提案使用深度测序技术提供了对小鼠前额叶皮层中压力调节的非编码RNA（即microRNA）和3'UTR（mRNA）的调节的探索性评估，以提供对与皮层功能障碍相关的压力相关疾病的新机制的洞察（例如，抑郁症）。在这些研究的结论，我们预计开发一个前所未有的压力调节非编码RNA调节的数据库，可以挖掘，以确定新的进程，危及皮质完整性，在面对长期的压力。新的应激调节miRNAs和3 '-UTR的鉴定将为我们了解人类应激相关疾病的机制提供信息，并为干预皮质介导的精神疾病定义新的途径。