The Post-translational Synthesis of Hypusine In eIF5A

eIF5A 中 Hypusine 的翻译后合成

• 批准号: 8553331
• 负责人: MYUNG H PARK
• 金额: $ 97.14万
• 依托单位: NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH
• 依托单位国家: 美国
• 资助国家: 美国
• 起止时间: 至
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/8553331
• 关键词: Acetylation; Alleles; Amino Acid Sequence; Amino Acids; Anabolism; Bacterial Genes; Binding Sites; Biochemical; Biochemical Pathway; Biochemical Reaction; Biological Assay; C-terminal; Cattle; Cell Proliferation; Defect; Development; Disease; ES Cell Line; Embryo; Embryonic Development; Enzymes; Escherichia coli; Eukaryotic Cell; Eukaryotic Initiation Factors; Female; Gene Targeting; Genes; Genotype; Glutamates; Glycine decarboxylase; Goals; Growth; Histidine; Homologous Gene; Human; Hydroxylation; In Vitro; Intervention; Ion Exchange; Leishmania donovani; Lysine; Lysine-tRNA Ligase; Mammalian Cell; Metabolic; Metals; Methods; Mimosine; Modification; Molecular; Molecular Mechanisms of Action; Mus; Orthologous Gene; Parasites; Pathway interactions; Phenotype; Physiological; Play; Polyamines; Positioning Attribute; Post-Translational Protein Processing; Preparation; Pronase; Property; Protein Isoforms; Proteins; Puromycin; Reaction; Recombinant Proteins; Recombinants; Regulation; Reporting; Role; Side; Site; Specificity; Spermidine/Spermine N1-Acetyltransferase; Staging; Structure; Tandem Repeat Sequences; Testis; Time; Visceral Leishmaniasis; amino group; base; blastocyst; deoxyhypusine; deoxyhypusine monooxygenase; deoxyhypusine synthase; design; embryo culture; factor EF-P; histone acetyltransferase; hypusine; in vitro activity; in vivo; inhibitor/antagonist; male; metal chelator; mutant; novel; polypeptide; pup; vector

In previous studies we have identified eIF5A as the only cellular protein that contains an unusual amino acid, hypusine N-epsilon-(4-amino-2-hydroxybutyl)lysine, and established that hypusine biosynthesis occurs by two sequential enzymatic reactions: i) deoxyhypusine synthesis and ii) deoxyhypusine hydroxylation. We have cloned and characterized the structural and catalytic properties of the two enzymes of the hypusine pathway, deoxyhypusine synthase (DHS) and deoxyhypusine hydroxylase (DOHH). We and others have demonstrated that hypusine modification is essential for the activity of eIF5A and for mammalian cell proliferation. Previously, we reported biochemical evidence for acetylation of eIF5A at Lys47 and its negative regulation by this acetylation. We have also obtained evidence for selective acetylation of hypusinated eIF5A, but not nonhypusinated eIF5A, by a polyamine metabolic enzyme, spermidine/spermine acetyltransferase 1 (SSAT1). The site of eIF5A acetylation by SSAT1 was identified as terminal amino group of the hypusine side chain by ion exchange chromatographic separation. The bovine testis eIF5A acetylated by SSAT1 was inactive in methionyl-puromycin synthesis assay indicating the importance of the basic side chain of hypusine residue in eIF5A activity. To investigate the physiological function of eIF5A isoforms and the hypusine modification enzymes, we performed their gene targeting in mice using the ES cell lines, RRE174 (Eif5a-1 +/-) and RRM039 (Dhps +/-) which have one allele of each gene disrupted by the gene trap method. The gene-targeted heterozygous agouti mice (Eif5a-1 +/-, or Dhps +/-) appeared to be normal and did not show any growth defects or phenotypes. The heterozygous agouti male and female mice were crossed and the pups born from the heterozygous intercrosses were genotyped. No pups were born with the genotype of Eif5a-1-/- or Dhps-/- indicating that homozygous disruption of either gene is embryonic lethal. To clarify the time point of embryonic lethality, we cultured the embryos at developmental stages (E3.5, E6.5, E7.5 and E8.5) and genotyped them by PCR. The Eif5a-1-/- homozygous embryo was identified on the blastocyst stage (E3.5), but not at later stage, indicating that Eif5a-1-/- embryo is viable up to 3.5 days, but not after 6 days. The same was true for Dhps-/- embryos. These findings demonstrate that eIF5A-1 and DHS play an essential role at the early stage of embryonic development. We investigated the molecular and structural basis of the function of DOHH from the protozoan parasite, Leishmania donovani, which causes visceral leishmaniasis. The L. donovani DOHH gene is 981 bp and encodes a putative polypeptide of 326 amino acids. DOHH is a HEAT-repeat protein with eight tandem repeats of -helical pairs. Four conserved histidine-glutamate sequences have been identified that may act as metal coordination sites. A 42 kDa recombinant protein with a His-tag was obtained by heterologous expression of DOHH in Escherichia coli. Purified recombinant DOHH effectively catalyzed the hydroxylation of the intermediate, eIF5A-deoxyhypusine (eIF5A-Dhp), in vitro. L. donovani DOHH (LdDOHH) showed 40.6% sequence identity with its human homolog. The alignment of L. donovani DOHH with the human homolog shows that there are two significant insertions in the former, corresponding to the alignment positions 159-162 (four amino acid residues) and 174-183 (ten amino acid residues) which are present in the variable loop connecting the N- and C-terminal halves of the protein, the latter being present near the substrate binding site. Deletion of the ten-amino-acid-long insertion decreased LdDOHH activity to 14% of the wild type recombinant LdDOHH. Metal chelators like ciclopirox olamine (CPX) and mimosine significantly inhibited the growth of L. donovani and DOHH activity in vitro. These inhibitors were more effective against the parasite enzyme than the human enzyme. The structural differences between the L. donovani DOHH and the human homolog may be exploited for structure based design of selective inhibitors against the parasite. EF-P is a bacterial ortholog of eIF5A and it does not undergo hypusine modification. Recently, two bacterial genes, yjeA and yjeK, encoding truncated homologs of class II lysyl-tRNA synthetase and of lysine-2,3-aminomutase, respectively, have been implicated in the modification of EF-P to convert a specific lysine to a hypothetical beta-lysyl-lysine. To obtain biochemical evidence for the hypothesis and to assess the role of this modification in EF-P activity, we have over-expressed EF-P alone, or in combination with YjeA and YjeK in E. coli using a polycistronic vector. Over-expression of EF-P alone, EF-P plus YjeA, and EF-P plus YjeA plus YjeK resulted in unmodified EF-P, alpha-lysyl EF-P and beta-lysyl EF-P, respectively. Mass spectrometric analyses confirmed the lysyl modification at lysine 34 in native EF-P as well as in recombinant alpha-lysyl or beta-lysyl EF-P proteins. The beta-lysyl-lysine isopeptide was identified in the exhaustive pronase digests of native EF-P and recombinant EF-P isolated from E.coli coexpressing EF-P, YjeA and YjeK, but not in the digests of proteins derived from the vectors encoding EF-P alone or EF-P together with YjeA, indicating that both enzymes, YjeA and YjeK, are required for beta-lysylation of EF-P. Endogenous EF-P and the recombinant beta-lysyl-EF-P stimulated N-formyl-methionyl-puromycin synthesis approximately four-fold over the preparations containing unmodified EF-P and/or alpha-lysyl-EF-P. The mutant lacking the modification site lysine (K34A) was inactive. This is the first report of biochemical evidence for the beta-lysylation of EF-P in vivo and the requirement for this modification for the activity of EF-P.

在之前的研究中，我们已经确定了eIF5A是唯一含有一种不寻常的氨基酸，hypusine N-epsilon-（4-氨基-2-羟基丁基）赖氨酸的细胞蛋白，并确定了hypusine的生物合成发生在两个连续的酶促反应中：i)脱氧hypusine合成和ii)脱氧hypusine羟基化。我们克隆并鉴定了hypusine途径的两个酶，脱氧hypusine合成酶（DHS）和脱氧hypusine羟化酶（DOHH）的结构和催化性能。我们和其他人已经证明，hypusine修饰对于eIF5A的活性和哺乳动物细胞增殖是必不可少的。在此之前，我们报道了eIF5A在Lys47位点乙酰化的生化证据以及这种乙酰化对其的负调控。我们还获得了多胺代谢酶亚精胺/精胺乙酰转移酶1 （SSAT1）选择性乙酰化的证据，而不是非乙酰化的eIF5A。通过离子交换色谱分离，确定了SSAT1对eIF5A乙酰化的位点为hypusine侧链的末端氨基。经SSAT1乙酰化的牛睾丸eIF5A在甲硫基嘌呤霉素合成实验中无活性，表明碱基侧链残基在eIF5A活性中起重要作用。