Matrix Metallopeptidase 19 (MMP19) and Optic Nerve Disease

基质金属肽酶 19 (MMP19) 和视神经疾病

• 批准号: 8919368
• 负责人: JOHN H FINGERT
• 金额: $ 22.2万
• 依托单位: UNIVERSITY OF IOWA
• 依托单位国家: 美国
• 财政年份: 2014
• 资助国家: 美国
• 起止时间: 2014-09-01 至 2016-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8919368
• 关键词: Adolescent; Adult; Affect; Animals; Binding; Biological; Biological Assay; Biological Process; Biology; Code; Coloboma; Copy Number Polymorphism; DNA; DNA Sequence; Data; Defect; Development; Diagnosis; Disease; Enhancers; Extracellular Matrix; Eye; Eye diseases; Foundations; Functional disorder; Future; Gene Expression; Genes; Genetic Enhancer Element; Genetic study; Glaucoma; Head; Health; Human; Individual; Intervention; Investigation; Laboratories; Lead; Mass Spectrum Analysis; Metalloproteases; Molecular Genetics; Mutagenesis; Mutation; Open-Angle Glaucoma; Optic Disk; Optic Nerve; Optics; Pathway interactions; Patients; Peptide Hydrolases; Process; Public Health; Regulation; Research; Role; Series; Structure; TBK1 gene; Testing; Tissues; United States; Vision; Visual; base; cohort; disability; genetic approach; glaucoma test; improved; insight; matrix metalloproteinase 19; next generation; next generation sequencing; novel; optic nerve disorder; programs; relating to nervous system; research study; transcription factor

DESCRIPTION (provided by applicant): Optic nerve diseases are a major public health problem. The defining feature of several optic nerve diseases, including glaucoma and cavitary optic disc anomaly (CODA), is excavation or cupping of the head of the optic nerve. The biological pathways that lead to excavation of the optic disc in these diseases, however, are incompletely understood. Consequently, there is a critical need to clarify the biological mechanisms that lead to loss of tissue (excavation) of the optic nerve to improve our understanding of disease processes and to develop new treatments for optic nerve diseases including CODA and glaucoma. We recently discovered that mutation of the matrix metallopeptidase 19 (MMP19) gene is associated with CODA. Specifically, we discovered a 6 kb DNA sequence upstream of the MMP19 gene that is triplicated in patients with CODA. Moreover, we have proven that this sequence is an active enhancer and upregulates expression of MMP19. We have also shown that MMP19 is specifically expressed in the optic nerve head, where the abnormalities of CODA occur. Moreover, gene expression data shows that MMP19 expression is greatly increased in the optic nerves of both human patients and animals with glaucoma. Together these findings support our hypothesis that abnormal regulation of MMP19 promotes congenital excavation of the optic disc in CODA. We will test this hypothesis with the following research aims: Aim 1: Test glaucoma patients for MMP19 mutations. We will test a cohort of glaucoma patients for copy number variations, regulatory sequence mutations, and coding sequence mutations in MMP19 with next generation sequencing. Aim 2: Identify the specific enhancer element and transcription factors that regulate MMP19 expression. We will 1) identify the specific DNA sequence of the MMP19 enhancer element via mutagenesis studies and 2) isolate transcription factor(s) that bind to the MMP19 enhancer using a DNA pull down assay and mass spectrometry. This proposal will clarify mechanisms of disease in CODA and provide insights in the process of optic nerve cupping in glaucoma. These investigations may provide the foundation for future studies to develop new sight-saving therapies.

描述(申请人提供)：视神经疾病是一个主要的公共卫生问题。包括青光眼和空洞性视盘异常(CODA)在内的几种视神经疾病的主要特征是视神经头部被切开或拔罐。然而，在这些疾病中导致视盘被挖出的生物学途径尚不完全清楚。因此，迫切需要阐明导致视神经组织丢失(挖出)的生物学机制，以提高我们对疾病过程的了解，并开发治疗包括CODA和青光眼在内的视神经疾病的新方法。我们最近发现基质金属肽酶19(MMP19)基因突变与慢性阻塞性肺疾病有关。具体地说，我们在MMP19基因上游发现了一个6kb的DNA序列，该序列在CODA患者中是三倍的。此外，我们已经证明该序列是一个活性增强子，并上调MMP19的表达。我们还表明，MMP19在视神经头中特异表达，那里发生了CODA的异常。此外，基因表达数据显示，MMP19在人类青光眼患者和动物的视神经中的表达都大大增加。综上所述，这些发现支持了我们的假设，即MMP19的异常调节促进了CODA患者视盘的先天性挖掘。我们将通过以下研究目标验证这一假设：目标1：检测青光眼患者MMP19突变。我们将用下一代测序法测试一组青光眼患者MMP19的拷贝数变异、调节序列突变和编码序列突变。目的2：确定调控MMP19表达的特异性增强子元件和转录因子。我们将1)通过诱变研究确定MMP19增强子元件的特异性DNA序列；2)通过DNA下拉实验和质谱法分离与MMP19增强子结合的转录因子(S)。这项建议将阐明CODA的发病机制，并为青光眼视神经拔罐的过程提供见解。这些研究可能为未来研究开发新的挽救视力的疗法提供基础。