Molecular mechanism of apolipoprotein binding to lipopolysaccharides

载脂蛋白与脂多糖结合的分子机制

• 批准号: 8399726
• 负责人: PAUL Michiel WEERS
• 金额: $ 10.28万
• 依托单位: CALIFORNIA STATE UNIVERSITY LONG BEACH
• 依托单位国家: 美国
• 财政年份: 2010
• 资助国家: 美国
• 起止时间: 2010-01-01 至 2014-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8399726
• 关键词: Acetylation; Address; Apolipoprotein A-I; Apolipoprotein E; Apolipoproteins; Apolipoproteins A; Apolipoproteins C; Area; Bacteria; Binding; Binding Proteins; Biochemical; Biological Models; Blood; Blood Circulation; Carbohydrates; Cardiovascular Diseases; Cause of Death; Cell Wall; Cessation of life; Charge; Cholesterol; Collaborations; Complement; Complex; Cysteine; Development; Disease; Environment; Escherichia coli; Fluorescence Spectroscopy; Foundations; Funding; Gram-Negative Bacteria; Grant; Health; Homeostasis; Human; Immune; Immune system; Infection; Intensive Care Units; Invaded; Invertebrates; Investigation; Knowledge; Lipid A; Lipid Binding; Lipids; Lipopolysaccharides; Lipoproteins; Lysine; Membrane; Modeling; Molecular; Molecular Biology; Molecular Conformation; Natural Immunity; Nature; Particle Size; Pattern Recognition; Play; Process; Protein Binding; Proteins; Publications; Recombinants; Research; Role; Sepsis; Septic Shock; Serum; Serum Proteins; Shock; Side; Site-Directed Mutagenesis; Solutions; Spectrum Analysis; Structure; Structure-Activity Relationship; System; Training; Transport Process; Tryptophan; United States National Institutes of Health; Variant; Work; apolipophorin III; base; flexibility; improved; insight; lipid transport; microbial; molecular mass; mortality; mutant; protein structure; protein structure function; stoichiometry; undergraduate student

DESCRIPTION (provided by applicant): Apolipoproteins are abundant serum proteins and well known for their role in lipid transport processes. Their importance in health and disease, in particular cardiovascular disease has been well established. It has become increasingly clear that apolipoproteins are an important component of the innate immune system. In that role, apolipoproteins have the ability to bind and neutralize lipopolysaccharides (LPS), which are abundantly present in the outer membrane of Gram-negative bacteria. When released in the circulation, LPS cause septic shock, a major cause of death in intensive care units. In the current proposal we aim to provide a molecular basis for the apolipoprotein-LPS interaction. To accomplish this, we will use invertebrate apolipophorin III (apoLp-III) as a model, since a wealth of structural information is available for this protein. Human apoA-I will be employed to complement our studies. It is hypothesized that apoLp-III is a pattern recognition protein, binding and neutralizing a variety of cell wall components of microbial invaders, most noticeably LPS. The flexible a-helical structure of the protein accommodates for large conformational changes, and is a key feature that facilitates the LPS binding interaction. Using recombinant apolipoprotein and various LPS variants, the binding interaction will be studied in solution using a combination of molecular biology, biochemical and biophysical analysis. The research plan includes the following specific aims. (i) A thorough biophysical characterization of the LPS/apoLp-III complex to gain insight in the apolipoprotein-LPS binding interaction. (ii) Elucidate the role of LPS-carbohydrate in the binding interaction. The importance of LPS carbohydrate and the need for a large protein conformational change will be investigated using molecular spectroscopy with single tryptophan and double cysteine mutant proteins. (iii) Since charge plays an important role in the LPS binding interaction with human apoA-I, key lysine residues in apoA-I necessary for LPS binding will be identified. Using a site-directed mutagenesis approach, lysine residues which are part of the apolipoprotein-LPS binding interaction will be identified. In conclusion, by employing a well established model protein for the structure-function relationship of exchangeable apolipoproteins in conjunction with human apoAI, important insights in the molecular mechanism of apolipoprotein-LPS interaction will be obtained. This knowledge can be used to improve treatment and develop new strategies to treat Gram-negative sepsis.

描述（由申请方提供）：载脂蛋白是丰富的血清蛋白，众所周知其在脂质转运过程中的作用。它们在健康和疾病，特别是心血管疾病方面的重要性已得到充分证实。越来越清楚的是，载脂蛋白是先天免疫系统的重要组成部分。在该作用中，载脂蛋白具有结合和中和脂多糖（LPS）的能力，脂多糖（LPS）大量存在于革兰氏阴性菌的外膜中。当LPS在循环中释放时，会引起脓毒性休克，这是重症监护病房中死亡的主要原因。在目前的建议，我们的目标是提供一个载脂蛋白-LPS相互作用的分子基础。为了实现这一点，我们将使用无脊椎动物载脂蛋白III（apoLp-III）作为模型，因为丰富的结构信息可用于这种蛋白质。人类apoA-I将被用来补充我们的研究。假设apoLp-III是一种模式识别蛋白，结合并中和微生物入侵者的多种细胞壁组分，最明显的是LPS。蛋白质的柔性α-螺旋结构适应大的构象变化，并且是促进LPS结合相互作用的关键特征。使用重组载脂蛋白和各种LPS变体，将使用分子生物学、生物化学和生物物理分析的组合在溶液中研究结合相互作用。研究计划包括以下具体目标。(i)LPS/apoLp-III复合物的全面生物物理表征，以深入了解载脂蛋白-LPS结合相互作用。(ii)阐明LPS-碳水化合物在结合相互作用中的作用。LPS碳水化合物的重要性和需要一个大的蛋白质构象变化将使用分子光谱与单色氨酸和双半胱氨酸突变蛋白质进行研究。(iii)由于电荷在LPS与人apoA-I的结合相互作用中起重要作用，因此将鉴定出LPS结合所必需的apoA-I中的关键赖氨酸残基。使用定点诱变方法，将鉴定作为载脂蛋白-LPS结合相互作用的一部分的赖氨酸残基。总之，通过采用一个完善的模型蛋白的结构-功能关系的可交换载脂蛋白与人类载脂蛋白AI，载脂蛋白-LPS相互作用的分子机制的重要见解将获得。这些知识可用于改善治疗和开发治疗革兰氏阴性脓毒症的新策略。