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The nervous system is connposed of hundreds of distinct cell types, each with unique morphology, connections, and gene expression. Importantly, perturbations in rare cell types, composing a small fraction of the entire brain, can result in devastating disorders afflicting the entire organism. For many disorders, the circuits and cells underlying the disease are unknown. Recent technical advances have driven an ongoing explosion of genome wide studies attempting to associate genetic polymorphisms with disorders of the CNS. Likewise, other technologies have dramatically reduced the cost of resequencing candidate genes to identify putative mutations. Still, the understanding of how polymorphisms in various genes can lead to a common disease is generally not understood. We have recently developed a methodology. Translating Ribosome Affinity Purification (TRAP), to isolate the complete suite of genes being employed by any particular cell type in the mammalian brain. Here, we apply this methodology to help bridge the gap between a polymorphism in a gene and a symptom in a disorder with two general approaches. First, when a cell type is suspected of being selectively vulnerable in a disorder, we can identify the suite of genes that are employed selectively in that particular cell type as potential disease candidates. Second, when there are many candidate genes known, we can analyze our cell-type specific translational profiles to determine if these various genes implicate a common cell type or circuit. For the first approach, we have isolated the complete translational profile of serotonergic neurons. As dysregulation of the serotonergic system has long been suspected to be involved in autism, we have tested the association between the serotonergic genes and autism in a large multiplex patient population. We found association with common variants in two genes, and identified a deleterious rare variant in one of these genes, the RNA binding protein BRUN0L6. We are now recapitulating this mutation in mice and testing for behaviors reminiscent of autism, as well as applying high-throughput sequencing to understand the consequence of this mutation on splicing and translation of RNA in vitro and in vivo.
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DOI: 10.3389/fnhum.2014.00012
发表时间: 2014
期刊: Frontiers in human neuroscience
影响因子: 2.9
作者: [Slimak MA, Ables JL, Frahm S, Antolin-Fontes B, Santos-Torres J, Moretti M, Gotti C, Ibañez-Tallon I]
通讯作者: Ibañez-Tallon I
Molecular recording to predict cell fate decisions and animal behavior
  • 批准号:
    10260139
  • 项目类别:
  • 资助金额:
    $369.33万
  • 财政年份:
    2021
  • 负责人:
    JOSEPH D DOUGHERTY
  • 依托单位:
PARALLEL ANALYSIS OF TRANSCRIPTION AND PROTEIN-DNAINTERACTIONS IN SINGLE CNS CELLS
  • 批准号:
    10044139
  • 项目类别:
  • 资助金额:
    $9.32万
  • 财政年份:
    2020
  • 负责人:
    JOSEPH D DOUGHERTY
  • 依托单位:
Washington University Intellectual and Developmental Disabilities Research Center
  • 批准号:
    10631989
  • 项目类别:
  • 资助金额:
    $126.0万
  • 财政年份:
    2020
  • 负责人:
    JOSEPH D DOUGHERTY
  • 依托单位:
Washington University Intellectual and Developmental Disabilities Research Center
  • 批准号:
    10630425
  • 项目类别:
  • 资助金额:
    $126.59万
  • 财政年份:
    2020
  • 负责人:
    JOSEPH D DOUGHERTY
  • 依托单位:
国内基金
海外基金
层出镰刀菌氮代谢调控因子AreA 介导伏马菌素 FB1 生物合成的作用机理
  • 批准号:
    2021JJ40433
  • 项目类别:
    省市级项目
  • 资助金额:
    --
  • 批准年份:
    2021
  • 负责人:
    孙磊
  • 依托单位:
寄主诱导梢腐病菌AreA和CYP51基因沉默增强甘蔗抗病性机制解析
  • 批准号:
    32001603
  • 项目类别:
    青年科学基金项目
  • 资助金额:
    24.0万元
  • 批准年份:
    2020
  • 负责人:
    段真珍
  • 依托单位:
AREA国际经济模型的移植.改进和应用
  • 批准号:
    18870435
  • 项目类别:
    面上项目
  • 资助金额:
    2.0万元
  • 批准年份:
    1988
  • 负责人:
    史树中
  • 依托单位: