Genome-wide identification of miRNAs associated with alcoholism endophenotypes

与酗酒内表型相关的 miRNA 的全基因组鉴定

• 批准号: 8439958
• 负责人: Katherina Kechris-Mays
• 金额: $ 30.9万
• 依托单位: UNIVERSITY OF COLORADO DENVER
• 依托单位国家: 美国
• 财政年份: 2013
• 资助国家: 美国
• 起止时间: 2013-09-15 至 2018-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8439958
• 关键词: Affect; Alcohol abuse; Alcohol consumption; Alcohol dependence; Alcoholism; Alcohols; American; Animal Model; Animals; Area; Base Pairing; Behavioral; Binding; Bioinformatics; Biological Assay; Biological Models; Brain; Brain region; Cataloging; Catalogs; Chromosome Mapping; Consumption; Data; Data Sources; Detection; Development; Diagnostic; Disease; Environmental Risk Factor; Ethanol; Exhibits; Family; Functional RNA; Future; Gene Expression; Gene Expression Profiling; Gene Expression Regulation; Generations; Genetic; Genetic Transcription; Genomics; Genotype; Goals; Health; Human; Inbred Mouse; Inbreeding; Individual; Informatics; Intake; Knowledge; Luciferases; Mammals; Maps; Mediating; Medicine; Messenger RNA; Methods; MicroRNAs; Mining; Modeling; Molecular; Molecular Profiling; Mouse Strains; Mus; Neurons; Pathway interactions; Phenotype; Play; Polymorphism Analysis; Predisposition; Proteins; Quantitative Trait Loci; Recombinants; Regulation; Research; Research Personnel; Resources; Reverse Transcriptase Polymerase Chain Reaction; Role; Site; Social Problems; Structure; Techniques; Test Result; Testing; Therapeutic; Transcript; Translations; Twin Multiple Birth; United States; Validation; Variant; Work; alcohol effect; alcohol research; alcohol response; alcohol sensitivity; alcohol use disorder; base; behavior test; density; endophenotype; experience; experimental analysis; genetic risk factor; genetic variant; genome wide association study; genome-wide; human subject; innovation; insight; meetings; mouse model; multidisciplinary; novel; public health relevance; trait; web site

DESCRIPTION (provided by applicant): Alcohol use disorders are a major health and social problem in the United States, with more than 18 million Americans who meet the diagnostic criteria for alcohol abuse or dependence. Both human and animal studies show that genetic and environmental factors, in addition to their interaction, play an important role in the development of alcoholism. The goal of this project is to identify genetic factors related to alcoholism in a mouse model system in order to understand mechanisms and inferred pathways predisposing individuals to the disease. The specific objective of this project is to examine how variation modulated through micro RNA (miRNA) activity and binding affects gene expression regulation in the brains of mice and is associated with alcoholism related traits (or endophenotypes). The LXS mouse panel will form the basis of our work and is a large recombinant inbred panel with has been subject to high-throughput gene expression and high-density genotyping profiling, in addition to extensive behavioral testing. In particular, the examined behavioral endophenotypes will be the predisposition to ethanol sensitivity, tolerance and consumption. To discover potential candidates for miRNA gene regulation, our research aims include the generation of high-throughput miRNA expression profiling data on the LXS panel and the use of novel bioinformatics techniques to integrate these data with the genotyping resources, gene expression data and behavioral testing results. Molecular assays will be performed to validate promising candidates and to localize brain region effects. Generating valuable miRNA data resources on the LXS panel for other investigators will be an important deliverable during the course of the study. To accomplish our objectives, a multidisciplinary investigative team has been assembled with extensive knowledge and experience in alcohol-related behavioral testing in mice, miRNA regulation, gene expression analysis and mouse genetics. At the conclusion of this project, the role of specific miRNA, and respective mRNA, associated with the predisposition to alcohol response and intake will be predicted and validated. These results will give mechanistic insight regarding genetic risk factors for alcoholism, information that can be used in the future for personalized medicine and other therapeutic and diagnostic purposes.

描述（由申请人提供）：酒精使用障碍是美国一个主要的健康和社会问题，有超过1800万美国人符合酒精滥用或依赖的诊断标准。人类和动物研究都表明，遗传和环境因素，以及它们之间的相互作用，在酗酒的发展中起着重要作用。该项目的目标是在小鼠模型系统中确定与酒精中毒相关的遗传因素，以了解机制和推断个体易患该疾病的途径。该项目的具体目标是研究通过微RNA （miRNA）活性和结合调节的变异如何影响小鼠大脑中的基因表达调节，并与酒精相关特征（或内表型）相关。LXS小鼠小组将构成我们工作的基础，是一个大型重组近交系小组，除了广泛的行为测试外，还进行了高通量基因表达和高密度基因分型分析。特别是，检查的行为内表型将是乙醇敏感性，耐受性和消耗的倾向。发掘潜力