Genetically Encoded Sensors Shed Light on Zinc Homeostasis

基因编码传感器揭示锌稳态

• 批准号: 8730167
• 负责人: Amy E Palmer
• 金额: $ 27.12万
• 依托单位: UNIVERSITY OF COLORADO
• 依托单位国家: 美国
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-05-01 至 2017-05-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8730167
• 关键词: Address; Affinity; Alzheimer' s Disease; Binding; Binding Proteins; Biochemistry; Biological Models; Cancerous; Cell Nucleus; Cell physiology; Cells; Cellular biology; Cessation of life; Collection; Complex; Cytosol; Diabetes Mellitus; Diarrhea; Disease; Equilibrium; Event; Family; Fingers; Functional disorder; Genes; Goals; Golgi Apparatus; Grant; Health; Homeostasis; Human; Human Genome; Image; Immune; Immune System Diseases; Impaired cognition; Individual; Intervention; Ions; Lead; Life; Light; Location; Malignant Neoplasms; Malignant neoplasm of prostate; Mammalian Cell; Maps; Measures; Metals; Micronutrients; Mitochondria; Nerve Degeneration; Nuclear Hormone Receptors; Onset of illness; Organelles; Organism; Pathway interactions; Play; Process; Prostate; Proteins; Proteome; Protocols documentation; Reporting; Research; Resolution; Role; Severities; Signal Pathway; Signal Transduction; Transition Elements; Vesicle; Work; Zinc; cancer cell; cell type; genetic regulatory protein; human disease; insight; meetings; prostate cancer cell; public health relevance; ratiometric; response; sensor; tool; tumor

DESCRIPTION (provided by applicant): Transition metal ions are critical to life as we know it and play essential roles in a wide swath of fundamental processes. Paradoxically, these essential metals are also toxic and therefore cells must tightly regulate metal accumulation, distribution and export. Not surprisingly, metal imbalance has profound implications for human health and is correlated with a host of pathophysiologies, including neurodegeneration, diabetes, cancer, and immune dysfunction. The long term goals of our research are to identify the mechanisms by which cells balance metal ions, define conditions under which cells use metals as signaling agents, and elucidate how metal imbalance leads to disease and degeneration. The current proposal focuses on zinc (Zn2+) as there is emerging evidence that transient Zn2+ signals can be generated within the cell, representing an exciting new paradigm for how metal ions influence cellular function. Zn2+ is an essential micronutrient required for human life. Its deficiency leads to impaired cognition, immune dysfunction, diarrhea, and death. Close to 3,000 genes in the human genome contain Zn2+ finger motifs, indicating that Zn2+ binding proteins are essential cell constituents. This is a truly staggering number, and represents close to 10% of the proteins encoded by the human genome. Our overall hypothesis is that Zn2+ serves as an important regulator of cell function, coordinating the activity of numerous cellular pathways, such that changes in Zn2+ status with disease alter downstream signaling targets, profoundly influencing cellular physiology. The basic premise of this hypothesis is that Zn2+ is dynamically regulated, and that changes in free Zn2+ influence canonical signaling pathways such as Ca2+, as well as alter the metal ion occupancy of the proteome, fine tuning the activity of hundreds, if not thousands of Zn2+-dependent proteins. Historically, our understanding of cellular Zn2+ homeostasis has been limited by the lack of tools to visualize and quantify free Zn2+ in specific locations (i.e. intracellular organelles) in living cells with high spatial and temporal resolution. In the last grant cycle, we addressed this need by developing a suite of fluorescent Zn2+ sensors genetically targeted to the cytosol, nucleus, ER, Golgi, and mitochondria. With these sensors we made remarkable discoveries about Zn2+ dynamics, interplay between Zn2+ and Ca2+, and provided the first glimpse of how the distribution of free Zn2+ may be altered in disease. In the next cycle, we will build on these discoveries and extend them to expand the repertoire of organelle-targeted sensors, thoroughly profile free Zn2+ distribution in normal versus diseased cells, define the mechanism(s) by which Zn2+ is altered, and identify the consequences of Zn2+ dysregulation for cellular function. Our proposed work has 3 specific aims: (1) Create new Zn2+ sensors that quantitatively report on free Zn2+ in organelles to enable comprehensive quantitative mapping of free Zn2+; (2) Define the changes in free Zn2+ in prostate cancer and identify the mechanism of dysregulation; and (3) Identify whether Zn2+ dysregulation plays a causative role in influencing downstream targets.

描述（由申请人提供）：过渡金属离子对生命至关重要，因为我们知道它，并在广泛的基本过程中发挥重要作用。巧合的是，这些必需金属也是有毒的，因此细胞必须严格调节金属的积累、分布和输出。毫不奇怪，金属失衡对人类健康有着深远的影响，并与许多病理生理学相关，包括神经退行性疾病，糖尿病，癌症和免疫功能障碍。我们研究的长期目标是确定细胞平衡金属离子的机制，确定细胞使用金属作为信号传导剂的条件，并阐明金属失衡如何导致疾病和退化。目前的建议集中在锌（Zn 2+），因为有新的证据表明，瞬时Zn 2+信号可以在细胞内产生，代表了金属离子如何影响细胞功能的一个令人兴奋的新范例。Zn 2+是人体生命所必需的微量营养素。它的缺乏会导致认知受损、免疫功能障碍、腹泻和死亡。人类基因组中有近3,000个基因含有锌指基序，表明锌结合蛋白是细胞的基本成分。这确实是一个惊人的数字，代表了人类基因组编码的近10%的蛋白质。我们的总体假设是，Zn 2+作为细胞功能的重要调节剂，协调许多细胞通路的活性，使得Zn 2+状态随疾病的变化改变下游信号传导靶点，深刻影响细胞生理学。这一假说的基本前提是Zn 2+是动态调节的，并且游离Zn 2+的变化影响经典信号传导途径如Ca 2+，以及改变蛋白质组的金属离子占有率，微调数百个（如果不是数千个）Zn 2+依赖性蛋白质的活性。从历史上看，我们对细胞Zn 2+稳态的理解受到缺乏工具的限制，这些工具可以以高的空间和时间分辨率可视化和量化活细胞中特定位置（即细胞内细胞器）的游离Zn 2+。在上一个资助周期中，我们通过开发一套遗传靶向细胞质、细胞核、ER、高尔基体和线粒体的荧光Zn 2+传感器来满足这一需求。有了这些传感器，我们对Zn 2+动力学、Zn 2+和Ca 2+之间的相互作用有了显著的发现，并首次了解了游离Zn 2+的分布在疾病中可能会如何改变。在下一个周期中，我们将在这些发现的基础上进行扩展，以扩大细胞器靶向传感器的库，彻底分析正常与患病细胞中的游离Zn 2+分布，定义Zn 2+改变的机制，并确定Zn 2+失调对细胞功能的影响。我们提出的工作有3个具体目标：（1）创建新的Zn 2+传感器，定量报告细胞器中的游离Zn 2+，以实现对游离Zn 2+的全面定量映射;（2）定义前列腺癌中游离Zn 2+的变化，并确定失调的机制;（3）确定Zn 2+失调是否在影响下游靶点中起着致病作用。