Regulation of HIV infection by Methamphetamine and non-coding RNAs

描述(由申请人提供)：项目摘要尽管非编码RNA构成了人类转录组的大部分，但我们对这些分子在包括艾滋病毒/艾滋病在内的大多数人类病理中的作用的了解仍然存在严重差距。在这里，我们建议破译非编码RNA及其相关的核糖核蛋白复合体，在调节原代巨噬细胞感染HIV-1方面的机制，特别是在暴露于甲基苯丙胺(METH)之后。这些研究将建立在一组强大的初步数据的基础上，这些数据表明，几个短的和长的非编码RNA参与了艾滋病毒的调节和对冰毒的反应。我们建议整合几种最先进的后基因组技术和新开发的实验方法，包括下一代测序和纳米颗粒递送系统，以提供对这些分子在促进和限制艾滋病毒复制方面的活动的重要见解。这些分析旨在全面识别在原代人类巨噬细胞中调节这些过程的非编码RNA，并通过实验描绘其细胞或病毒靶标。综上所述，这些研究将为基于RNA的宿主-病原体相互作用和抗病毒功能的分子和细胞机制提供重要的知识。

DESCRIPTION (provided by applicant): PROJECT SUMMARY Although non-coding RNAs comprise a majority of the human transcriptome, there remain critical gaps in our knowledge of the role of these molecules in most human pathologies, including HIV/AIDS. Here, we propose to decipher the mechanisms of non-coding RNAs, and their associated ribonucleoprotein complexes, in regulating HIV-1 infection of primary macrophages, particularly after exposure to Methamphetamine (METH). These studies will build on a powerful set of preliminary data that implicate several short and long non-coding RNAs in the regulation of HIV and response to METH. We propose to integrate several state-of-the-art post-genome technologies and newly developed experimental methodologies, including next generation sequencing and nanoparticle delivery systems, to provide important insights into the activity of these molecules in both promoting and restricting HIV replication. These analyses are designed to comprehensively identify non-coding RNAs that regulate these processes in primary human macrophages, and experimentally delineate their cellular or viral targets. Taken together, these studies will provide significant knowledge towards the molecular and cellular mechanisms underlying RNA-based host-pathogen interactions and antiviral functions.