Global Genetic Analysis of the Mga Virulence Regulon

Mga 毒力调节子的全局遗传分析

• 批准号: 8606162
• 负责人: Kayla M Valdes
• 金额: $ 4.27万
• 依托单位: UNIV OF MARYLAND, COLLEGE PARK
• 依托单位国家: 美国
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-02-01 至 2016-01-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8606162
• 关键词: Acute Glomerulonephritis; Alleles; Animal Model; Benign; Biochemical Genetics; Cell physiology; Cells; Disease; Environment; Fellowship; Gene Deletion; Genes; Genetic; Genetic Transcription; Genome; Genomics; Goals; Growth; Human; Immune; Impetigo; Infection; Libraries; Link; Methodology; Mutagenesis; Necrotizing fasciitis; Pathogenesis; Pathway interactions; Pharyngitis; Play; Regulation; Regulatory Pathway; Regulon; Reporter; Rheumatic Fever; Role; Site; Streptococcus pyogenes; Tissues; Toxic Shock Syndrome; Virulence; Work; attenuation; base; clinically relevant; deep sequencing; fitness; gene interaction; genetic analysis; genome sequencing; innovation; interest; mutant; pathogen

DESCRIPTION (provided by applicant): The Group A Streptococcus (GAS) has the ability to survive in many host tissues. It is important to have a better understanding of the mechanisms by which this pathogen can adapt and persist at the different sites within the host. The GAS cell utilizes many regulatory pathways in order to sense the host environment; one such pathway is the Mga virulence regulon. In this application, we hope to identify the role Mga plays as a virulence regulator as well as its role in cellular physiology through biochemical and genetic studies. The strain 5448-AN, whose genome sequence is available to us, will be used as a representative of the invasive and globally disseminated M1T1 GAS clone. In order to identify genes that are important for Mga regulation, we will use a Pmga-gusA reporter allele within the M1T1 5448- AN genome. This strain will be subjected to saturating transposon mutagenesis in order to create a mutant library using a newly developed mariner-based transposon (OSKAR), which has been optimized for efficient random mutagenesis within GAS. By identifying genes required for Mga regulation, we can begin to assemble the direct and indirect interactions of genes on the transcription of mga. We will also use the innovative genomic methodology of deep sequencing of transposon mutants (Tn-seq) in order to identify genetic interactions of the mga gene. This will provide us with a better understanding of how the Mga virulence regulator contributes to both pathogenesis and cellular physiology. This will be accomplished by using OSKAR, to create saturated mutant libraries in both wild type and mga 5448-AN backgrounds. We will determine the fitness of genes that are utilized for growth in rich medium (THY). In order to better characterize our findings, a selected number of genes shown to be involved in interacting with mga will be chosen for further analysis to identify their role in GAS virulence. The overarching goal of the work proposed in this fellowship is to define the full extent of the Mga regulatory network and how it links virulence and different aspects of cell physiology in the clinically relevant M1T1 GAS using global genetic analyses. The successful completion of these studies will help to resolve the complexity and interactions between regulatory networks important for GAS pathogenesis.

性状（由申请人提供）：A组链球菌（GAS）能够在许多宿主组织中存活。重要的是要有一个更好的了解这种病原体可以适应和坚持在宿主的不同部位的机制。GAS细胞利用许多调节途径来感知宿主环境;其中一种途径是Mga毒力调节子。在本申请中，我们希望通过生物化学和遗传学研究确定Mga作为毒力调节剂的作用以及其在细胞生理学中的作用。菌株5448-AN（其基因组序列可供我们使用）将被用作侵入性和全球传播的M1 T1 GAS克隆的代表。为了鉴定对Mga调节重要的基因，我们将使用M1 T1 5448- AN基因组内的Pmga-gusA报告等位基因。该菌株将进行饱和转座子诱变，以便使用新开发的基于水手的转座子（OSKAR）创建突变体文库，该转座子已针对GAS内的有效随机诱变进行了优化。通过鉴定Mga调控所需的基因，我们可以开始组装基因对Mga转录的直接和间接相互作用。我们还将使用转座子突变体深度测序（Tn-seq）的创新基因组方法，以确定mga基因的遗传相互作用。这将使我们更好地了解Mga毒力调节因子如何促进发病机制和细胞生理学。这将通过使用OSKAR来实现，以在野生型和mga 5448-AN背景中创建饱和突变体文库。我们将确定用于在丰富培养基（THY）中生长的基因的适应性。为了更好地表征我们的发现，将选择选定数量的基因参与与mga相互作用，以进一步分析，以确定它们在GAS毒力中的作用。这项研究提出的工作的总体目标是定义Mga调控网络的全部范围，以及它如何使用全球遗传分析将临床相关的M1 T1 GAS中的毒力和细胞生理学的不同方面联系起来。这些研究的成功完成将有助于解决GAS发病机制重要的调控网络之间的复杂性和相互作用。